RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 C1orf123Q9NWV4 160 aa7.05□□□□□ -1.28
TRAPPC9-212ENST00000521944 ADA2Q9NZK5 511 aa7.05□□□□□ -1.28
TRAPPC9-212ENST00000521944 C12orf71A8MTZ7 269 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 ZSCAN12O43309 604 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 MSR1P21757 451 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 CA6P23280 308 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 ANOS1P23352 680 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 ECI1P42126 302 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 DAP3P51398 398 aaKnown RBP7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 CLNS1AP54105 237 aaKnown RBP7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 LINC00310P59036 64 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 GK2Q14410 553 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 OR1F12Q8NHA8 337 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 BBS10Q8TAM1 723 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 GATAD1Q8WUU5 269 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 DUS3LQ96G46 650 aaKnown RBP7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 INIPQ9NRY2 104 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 SELENONQ9NZV5 590 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 PSMC3IPQ9P2W1 217 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 ZMAT5Q9UDW3 170 aaKnown RBP7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 NDUFAF1Q9Y375 327 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 SMAD5-AS1Q9Y6J3 95 aa7.04□□□□□ -1.28
TRAPPC9-212ENST00000521944 A0A1W2PPL8 197 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 F2RL2O00254 374 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 RFXANKO14593 260 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 RIPK2O43353 540 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 CHP2O43745 196 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 HIST1H2ABP04908 130 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 ZCCHC18P0CG32 403 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 RGS8P57771 180 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 RGNQ15493 299 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 PCK2Q16822 640 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 ZNF613Q6PF04 617 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 HIST3H2AQ7L7L0 130 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 ZNF572Q7Z3I7 529 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 NANOGNBQ7Z5D8 188 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 RBM45Q8IUH3 476 aaKnown RBP7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 EGFL6Q8IUX8 553 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 MKXQ8IYA7 352 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 OR4D11Q8NGI4 311 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 OR5L1Q8NGL2 311 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 ACOT11Q8WXI4 607 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 HIST1H2ACQ93077 130 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 APOBEC3DQ96AK3 386 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 DUX3Q96PT4 197 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 FMO2Q99518 471 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 PRSS27Q9BQR3 290 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 CPPED1Q9BRF8 314 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 TM2D3Q9BRN9 247 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 ALG12Q9BV10 488 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 KRTAP4-5Q9BYR2 181 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 NUF2Q9BZD4 464 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 ANGPT4Q9Y264 503 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 HERC1Q15751 4861 aa7.03□□□□□ -1.28
TRAPPC9-212ENST00000521944 NPIPB13A6NJU9 1138 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 NPIPB4C9JG80 1138 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 M0R3H8 397 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 RER1O15258 196 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 NDUFB3O43676 98 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 ITM2AO43736 263 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 RHBDL1O75783 438 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 FRMD6-AS1P0C7T7 363 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 UMPSP11172 480 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 HOXB9P17482 250 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 KRT4P19013 534 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 FUT1P19526 365 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 CEBPDP49716 269 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 SCRN3Q0VDG4 424 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 DGUOKQ16854 277 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 KRTAP27-1Q3LI81 207 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 RABL3Q5HYI8 236 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 KHDC1LQ5JSQ8 128 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 ATPAF1Q5TC12 328 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 WDR86Q86TI4 376 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 NAA40Q86UY6 237 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 C4orf33Q8N1A6 199 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 OR5T2Q8NGG2 359 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 OR6T1Q8NGN1 323 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 NFKBIDQ8NI38 313 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 IFT81Q8WYA0 676 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 DDB2Q92466 427 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 H1FXQ92522 213 aaKnown RBP7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 ISOC1Q96CN7 298 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 MCHR1Q99705 422 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 ZNF649Q9BS31 505 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 TXNIPQ9H3M7 391 aa7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 CACYBPQ9HB71 228 aaKnown RBP7.02□□□□□ -1.29
TRAPPC9-212ENST00000521944 PKHD1P08F94 4074 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 TNCP24821 2201 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 COPEO14579 308 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 AMY1AP04745 511 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 AMY2AP04746 511 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 GRPP07492 148 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 MUC1P15941 1255 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 MYCNOSP40205 109 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 NCALDP61601 193 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 RPL23AP62750 156 aaKnown RBP7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 TOP3AQ13472 1001 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 FHL1Q13642 323 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 OR8G1Q15617 311 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms