RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 DPM1O60762 260 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 EEDO75530 441 aaKnown RBP2.96□□□□□ -1.94
SKP1-208ENST00000521216 VAMP5O95183 116 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 SNAP29O95721 258 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 DHFRP00374 187 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 CST1P01037 141 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 CALB1P05937 261 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 BCHEP06276 602 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 KRT16P08779 473 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 ZNF286BP0CG31 522 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 PSMC3P17980 439 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 TALDO1P37837 337 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 EIF3EP60228 445 aaKnown RBP2.96□□□□□ -1.94
SKP1-208ENST00000521216 SPCS3P61009 180 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 MOBPQ13875 183 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 ITIH4Q14624 930 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 YIF1BQ5BJH7 314 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 ELP2Q6IA86 826 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 METAP1DQ6UB28 335 aaPredicted RBP2.96□□□□□ -1.94
SKP1-208ENST00000521216 BBS7Q8IWZ6 715 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 C15orf56Q8N910 161 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 C12orf29Q8N999 325 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 OR5T1Q8NG75 326 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 OR52N1Q8NH53 320 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 ZNF502Q8TBZ5 544 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 PYDC1Q8WXC3 89 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 DNAJC9Q8WXX5 260 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 TRNT1Q96Q11 434 aaKnown RBP2.96□□□□□ -1.94
SKP1-208ENST00000521216 CYTH2Q99418 400 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 KCNS3Q9BQ31 491 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 TEKT3Q9BXF9 490 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 SLC22A4Q9H015 551 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 RPP21Q9H633 154 aaKnown RBP2.96□□□□□ -1.94
SKP1-208ENST00000521216 ZC4H2Q9NQZ6 224 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 AGPAT3Q9NRZ7 376 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 ZNF355PQ9NSJ1 428 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 PISDQ9UG56 409 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 CYB5R1Q9UHQ9 305 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 STARD10Q9Y365 291 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 CSDC2Q9Y534 153 aaKnown RBP2.96□□□□□ -1.94
SKP1-208ENST00000521216 USH1CQ9Y6N9 552 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 PCM1Q15154 2024 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 LAMC1P11047 1609 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 TONSLQ96HA7 1378 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 ZNF518AQ6AHZ1 1483 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 NRXN1Q9ULB1 1477 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 SYNMO15061 1565 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 ANKRD50Q9ULJ7 1429 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 CDK13Q14004 1512 aaKnown RBP2.95□□□□□ -1.94
SKP1-208ENST00000521216 CLASP1Q7Z460 1538 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 KDM5BQ9UGL1 1544 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 TMEM120BA0PK00 339 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 XKRY2A2RUG3 117 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 F8W036 122 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 H0Y8G0 127 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 H0YJX3 145 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 PGRMC1O00264 195 aaKnown RBP2.95□□□□□ -1.94
SKP1-208ENST00000521216 TXNDC9O14530 226 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 CLOCKO15516 846 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 AQP9O43315 295 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 RPP14O95059 124 aaKnown RBP2.95□□□□□ -1.94
SKP1-208ENST00000521216 AHSA1O95433 338 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 NSA2O95478 260 aaKnown RBP2.95□□□□□ -1.94
SKP1-208ENST00000521216 SERPINA5P05154 406 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 FGF4P08620 206 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 OCM2P0CE71 109 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 OCMP0CE72 109 aaPredicted RBP2.95□□□□□ -1.94
SKP1-208ENST00000521216 NQO1P15559 274 aaKnown RBP2.95□□□□□ -1.94
SKP1-208ENST00000521216 ZNF250P15622 560 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 TCN2P20062 427 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 HCAR3P49019 387 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 AP1S1P61966 158 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 ARG2P78540 354 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 C2orf54Q08AI8 447 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 PON2Q15165 354 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 SHHQ15465 462 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 KCNJ8Q15842 424 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 SNRNP35Q16560 246 aaKnown RBP2.95□□□□□ -1.94
SKP1-208ENST00000521216 HSP90AA4PQ58FG1 418 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 C1orf185Q5T7R7 199 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 CLEC6AQ6EIG7 209 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 DEGS2Q6QHC5 323 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 TMEM107Q6UX40 140 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 RTL4Q6ZR62 310 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 FAM122BQ7Z309 247 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 TAC4Q86UU9 113 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 ZNF709Q8N972 641 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 OR5B3Q8NH48 314 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 KCNG3Q8TAE7 436 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 GPR151Q8TDV0 419 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 CCDC12Q8WUD4 166 aaPredicted RBP2.95□□□□□ -1.94
SKP1-208ENST00000521216 KCTD4Q8WVF5 259 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 CAPSLQ8WWF8 208 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 BORCS5Q969J3 196 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 NTAN1Q96AB6 310 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 SPIN2AQ99865 258 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 SPIN2BQ9BPZ2 258 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 FRMD8P1Q9BZ68 369 aaPredicted RBP2.95□□□□□ -1.94
SKP1-208ENST00000521216 HDHD2Q9H0R4 259 aa2.95□□□□□ -1.94
SKP1-208ENST00000521216 METTL8Q9H825 291 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms