RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 RAB3CQ96E17 227 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 SCMH1Q96GD3 660 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 CMTM3Q96MX0 182 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 OR10A2Q9H208 303 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 GHITMQ9H3K2 345 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 SLA2Q9H6Q3 261 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 IL17BQ9UHF5 180 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 GSTZ1O43708 216 aaPredicted RBP10.04□□□□□ -0.8
CLK4-206ENST00000520878 MTRF1O75570 445 aaKnown RBP10.04□□□□□ -0.8
CLK4-206ENST00000520878 SFRP5Q5T4F7 317 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 ZC3H10Q96K80 434 aaKnown RBP10.04□□□□□ -0.8
CLK4-206ENST00000520878 CHST6Q9GZX3 395 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 NELFAQ9H3P2 528 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 TMEM9BQ9NQ34 198 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 TNRC18O15417 2968 aaPredicted RBP10.04□□□□□ -0.8
CLK4-206ENST00000520878 CCDC187A0A096LP49 1063 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 EEF1E1-BLOC1S5C9J1V9 151 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 ANGPTL7O43827 346 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 IGHMP01871 453 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 BLVRBP30043 206 aaPredicted RBP10.04□□□□□ -0.8
CLK4-206ENST00000520878 GRB2P62993 217 aaKnown RBP10.04□□□□□ -0.8
CLK4-206ENST00000520878 RAB12Q6IQ22 244 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 NHLRC1Q6VVB1 395 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 CDH24Q86UP0 819 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 FOXRED2Q8IWF2 684 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 OR6S1Q8NH40 331 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
CLK4-206ENST00000520878 SRXN1Q9BYN0 137 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 ARL6Q9H0F7 186 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 CST11Q9H112 138 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 POFUT1Q9H488 388 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 C12orf49Q9H741 205 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 FBXO4Q9UKT5 387 aa10.04□□□□□ -0.8
CLK4-206ENST00000520878 CCSO14618 274 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 CTDSPLO15194 276 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 ZNF35P13682 527 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 PI3P19957 117 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 AVPR2P30518 371 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 Q5BKY6 102 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 ATP1A1-AS1Q5TC04 95 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 DOK3Q7L591 496 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 OR2V1Q8NHB1 315 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 NICN1Q9BSH3 213 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 SLC6A15Q9H2J7 730 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 ZFP64Q9NPA5 681 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 FAM206AQ9NX38 181 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 CELSR3Q9NYQ7 3312 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 B4E171 279 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 HLA-AP01891 365 aaKnown RBP10.03□□□□□ -0.8
CLK4-206ENST00000520878 C4BPBP20851 252 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 SRD5A2P31213 254 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 CD96P40200 585 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 TSPAN7P41732 249 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 POU4F3Q15319 338 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 RSU1Q15404 277 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 OR1C1Q15619 314 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 PHYHD1Q5SRE7 291 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 SLC25A47Q6Q0C1 308 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 GALNT16Q8N428 558 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 OR10S1Q8NGN2 331 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 LILRB4Q8NHJ6 448 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 MRPL13Q9BYD1 178 aaKnown RBP10.03□□□□□ -0.8
CLK4-206ENST00000520878 LOC102723996A0A087X1L8 192 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 SDCBPO00560 298 aaPredicted RBP10.03□□□□□ -0.8
CLK4-206ENST00000520878 FAM157BP0CG42 384 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 CCL2P13500 99 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 CCL11P51671 97 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 RAC3P60763 192 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 ELFN2Q5R3F8 820 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 RHOUQ7L0Q8 258 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 NLRC3Q7RTR2 1065 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 TMPRSS7Q7RTY8 843 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 CSNK2A3Q8NEV1 391 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 SEH1LQ96EE3 360 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 ZNF319Q9P2F9 582 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 SLC23A1Q9UHI7 598 aa10.03□□□□□ -0.8
CLK4-206ENST00000520878 ICE1Q9Y2F5 2266 aa10.02□□□□□ -0.8
CLK4-206ENST00000520878 ACACAQ13085 2346 aa10.02□□□□□ -0.8
CLK4-206ENST00000520878 NDUFB6O95139 128 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 ZNF32P17041 273 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 DLX5P56178 289 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 PDCD1Q15116 288 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 BEX5Q5H9J7 111 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 CDCP2Q5VXM1 449 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 TMEM104Q8NE00 496 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 OR4K15Q8NH41 348 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 KCNG3Q8TAE7 436 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 BORCS8Q96FH0 119 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 GON7Q9BXV9 100 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 PLEKHJ1Q9NW61 149 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 A0A1W2PNV4 684 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 ZNF780AO75290 641 aaPredicted RBP10.02□□□□□ -0.81
CLK4-206ENST00000520878 KNG1P01042 644 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 APOC1P02654 83 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 VSIG8P0DPA2 414 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 HRH1P35367 487 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 FDX2Q6P4F2 183 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 RNF144BQ7Z419 303 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 P4HA3Q7Z4N8 544 aa10.02□□□□□ -0.81
CLK4-206ENST00000520878 BHLHE23Q8NDY6 225 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms