RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 MAP3K3Q99759 626 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 EDEM2Q9BV94 578 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 RAB33BQ9H082 229 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 VSX1Q9NZR4 365 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 A0A1W2PP11 408 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 SOCS1O15524 211 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 PLRG1O43660 514 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 CELA2BP08218 269 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 HLA-DOBP13765 273 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 HNRNPA2B1P22626 353 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 AKT2P31751 481 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 MIDNQ504T8 468 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 C1orf140Q5VVS0 124 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 OR2A2Q6IF42 318 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 OR2AJ1Q8NGZ0 328 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 HIST1H2BAQ96A08 127 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 C2orf50Q96LR7 162 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 IP6K3Q96PC2 410 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 URM1Q9BTM9 101 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 FOXQ1Q9C009 403 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 S1PR5Q9H228 398 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 TXNIPQ9H3M7 391 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 PDE7BQ9NP56 450 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 URGCP-MRPS24S4R325 110 aa11.45□□□□□ -0.58
TRAPPC9-208ENST00000520857 DENND4AQ7Z401 1863 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 UMAD1C9J7I0 102 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 NSA2O95478 260 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 MELTFP08582 738 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 CD79AP11912 226 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 C14orf28Q4W4Y0 310 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 PDZD11Q5EBL8 140 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 DRAM2Q6UX65 266 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 C19orf47Q8N9M1 422 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 PNLDC1Q8NA58 520 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 NMES1Q9C002 83 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 TICRRQ7Z2Z1 1910 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 SFT2D2O95562 160 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 MT-ND4LP03901 98 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 SLC6A8P48029 635 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 NAAAQ02083 359 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 TFF2Q03403 129 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 C15orf54Q8N8G6 183 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 TMEM104Q8NE00 496 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 SEMA6DQ8NFY4 1073 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 TSLPQ969D9 159 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 SLAMF9Q96A28 289 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 SPSB2Q99619 263 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 MYOZ1Q9NP98 299 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 FBXL17Q9UF56 701 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 A0A1W2PPE3 182 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 COLCA2A8K830 154 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 LY86O95711 162 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 TXNDC12O95881 172 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 HOXB1P14653 301 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 MYOGP15173 224 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 CSRP1P21291 193 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 SLC6A9P48067 706 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 DVL1P1P54792 670 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 SNU13P55769 128 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 TLE3Q04726 772 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 KIAA0141Q14154 515 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 TOMM20Q15388 145 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 SGCBQ16585 318 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 PTCRAQ6ISU1 281 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 C5orf46Q6UWT4 87 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 ZNF283Q8N7M2 679 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 FLVCR1-AS1Q8TAF5 88 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 AQP3Q92482 292 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 ADAT3Q96EY9 351 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 SAT2Q96F10 170 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 TGM7Q96PF1 710 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 GAS2L1Q99501 681 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 BCL2L14Q9BZR8 327 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 MMP24Q9Y5R2 645 aa11.44□□□□□ -0.58
TRAPPC9-208ENST00000520857 A0A1W2PPE2 198 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 RGS19P49795 217 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 NDUFA6P56556 154 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 FXYD4P59646 89 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 DMWDQ09019 674 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 RNF212Q495C1 297 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 TMEM196Q5HYL7 178 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 SHISA6Q6ZSJ9 500 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 ARHGAP5-AS1Q96IT6 56 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 FAM212BQ9NTI7 297 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 BORCS7-ASMTA0A0B4J1R7 106 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 XRCC2O43543 280 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 IFNA17P01571 189 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 IL2RAP01589 272 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 H2AFB1P0C5Y9 115 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 SERPINA2P20848 420 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 UNC119Q13432 240 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 ANKRD55Q3KP44 614 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 ABCA11PQ4W5N1 156 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 FAHD2BQ6P2I3 314 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 FAHD2AQ96GK7 314 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 BMFQ96LC9 184 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 CNTNAP3Q9BZ76 1288 aa11.43□□□□□ -0.58
TRAPPC9-208ENST00000520857 SLC33A1O00400 549 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC9-208ENST00000520857 SCGNO76038 276 aa11.42□□□□□ -0.58
TRAPPC9-208ENST00000520857 BLVRBP30043 206 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms