RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 RRAGDQ9NQL2 400 aaPredicted RBP2.91□□□□□ -1.94
PTPN12-213ENST00000519553 A0A075B6Q4 140 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 PLIN3O60664 434 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 FGFR1OPO95684 399 aaKnown RBP2.9□□□□□ -1.95
PTPN12-213ENST00000519553 LHBP01229 141 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 PSMB5P28074 263 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 GDI2P50395 445 aaKnown RBP2.9□□□□□ -1.95
PTPN12-213ENST00000519553 RAB7AP51149 207 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 RTL4Q6ZR62 310 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 OR5AR1Q8NGP9 310 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 OR52E5Q8NH55 327 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 GHSRQ92847 366 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 SGTBQ96EQ0 304 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 MRM3Q9HC36 420 aaKnown RBP2.9□□□□□ -1.95
PTPN12-213ENST00000519553 RGS18Q9NS28 235 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 HIVEP2P31629 2446 aa2.9□□□□□ -1.95
PTPN12-213ENST00000519553 KCNE1BA0A087WTH5 132 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 TSPAN11A1L157 253 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 HMMRO75330 724 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 HTR1DP28221 377 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 NBL1P41271 181 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 PPICP45877 212 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 UBE2MP61081 183 aaKnown RBP2.89□□□□□ -1.95
PTPN12-213ENST00000519553 IL15RAQ13261 267 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 RCN1Q15293 331 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 TRMT5Q32P41 509 aaKnown RBP2.89□□□□□ -1.95
PTPN12-213ENST00000519553 ZNF829Q3KNS6 432 aaPredicted RBP2.89□□□□□ -1.95
PTPN12-213ENST00000519553 SLC25A35Q3KQZ1 300 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 OR5M1Q8NGP8 315 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 OR1P1Q8NH06 330 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 TSEN15Q8WW01 171 aaKnown RBP2.89□□□□□ -1.95
PTPN12-213ENST00000519553 GSDMAQ96QA5 445 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 FRMD8P1Q9BZ68 369 aaPredicted RBP2.89□□□□□ -1.95
PTPN12-213ENST00000519553 TOLLIPQ9H0E2 274 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 LHX5Q9H2C1 402 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 DCAF16Q9NXF7 216 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 UBIAD1Q9Y5Z9 338 aa2.89□□□□□ -1.95
PTPN12-213ENST00000519553 RAD1O60671 282 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 MT-ND4P03905 459 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 GLAP06280 429 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 GABRG2P18507 467 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 RFC3P40938 356 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 TNFSF9P41273 254 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 RAB9AP51151 201 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 RBX1P62877 108 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 ITIH4Q14624 930 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 BRD3OSQ6XYD6 125 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 C16orf47Q6ZP98 133 aaPredicted RBP2.88□□□□□ -1.95
PTPN12-213ENST00000519553 BZW1Q7L1Q6 419 aaKnown RBP2.88□□□□□ -1.95
PTPN12-213ENST00000519553 LUZP2Q86TE4 346 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 JAGN1Q8N5M9 183 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 RHOXF2Q9BQY4 288 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 RAB20Q9NX57 234 aa2.88□□□□□ -1.95
PTPN12-213ENST00000519553 TRIM64CA6NLI5 447 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 TEX46H3BTG2 121 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 ERI3O43414 337 aaKnown RBP2.87□□□□□ -1.95
PTPN12-213ENST00000519553 CHMP2AO43633 222 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 HLA-HP01893 362 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 NTF3P20783 257 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 HMOX2P30519 316 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 MYCNOSP40205 109 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 SERPINB8P50452 374 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 UBE2E1P51965 193 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 CMC4P56277 68 aaPredicted RBP2.87□□□□□ -1.95
PTPN12-213ENST00000519553 CUL2Q13617 745 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 FAM53BQ14153 422 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 DMC1Q14565 340 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 TWF2Q6IBS0 349 aaKnown RBP2.87□□□□□ -1.95
PTPN12-213ENST00000519553 TMEM53Q6P2H8 277 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 EIF3MQ7L2H7 374 aaKnown RBP2.87□□□□□ -1.95
PTPN12-213ENST00000519553 BPIFCQ8NFQ6 507 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 OR1L1Q8NH94 360 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 RXFP4Q8TDU9 374 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 DYNLL2Q96FJ2 89 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 NUDT9Q9BW91 350 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 C20orf96Q9NUD7 363 aaPredicted RBP2.87□□□□□ -1.95
PTPN12-213ENST00000519553 SHROOM3Q8TF72 1996 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 NID2Q14112 1375 aa2.87□□□□□ -1.95
PTPN12-213ENST00000519553 ANKRD65E5RJM6 399 aa2.86□□□□□ -1.95
PTPN12-213ENST00000519553 CD34P28906 385 aa2.86□□□□□ -1.95
PTPN12-213ENST00000519553 CASP12Q6UXS9 341 aa2.86□□□□□ -1.95
PTPN12-213ENST00000519553 SSX9Q7RTT3 188 aa2.86□□□□□ -1.95
PTPN12-213ENST00000519553 ERO1BQ86YB8 467 aa2.86□□□□□ -1.95
PTPN12-213ENST00000519553 KRTAP13-1Q8IUC0 172 aa2.86□□□□□ -1.95
PTPN12-213ENST00000519553 OR4K3Q96R72 315 aa2.86□□□□□ -1.95
PTPN12-213ENST00000519553 CCNB1IP1Q9NPC3 277 aa2.86□□□□□ -1.95
PTPN12-213ENST00000519553 SEC16AO15027 2179 aa2.85□□□□□ -1.95
PTPN12-213ENST00000519553 ADGRL1O94910 1474 aa2.85□□□□□ -1.95
PTPN12-213ENST00000519553 CACNG3O60359 315 aa2.85□□□□□ -1.95
PTPN12-213ENST00000519553 SLC16A7O60669 478 aa2.85□□□□□ -1.95
PTPN12-213ENST00000519553 FCN3O75636 299 aa2.85□□□□□ -1.95
PTPN12-213ENST00000519553 TGM6O95932 706 aa2.85□□□□□ -1.95
PTPN12-213ENST00000519553 GGT2P36268 569 aa2.85□□□□□ -1.95
PTPN12-213ENST00000519553 RPS15AP62244 130 aaKnown RBP2.85□□□□□ -1.95
PTPN12-213ENST00000519553 ELF3P78545 371 aaPredicted RBP2.85□□□□□ -1.95
PTPN12-213ENST00000519553 DEGS2Q6QHC5 323 aa2.85□□□□□ -1.95
PTPN12-213ENST00000519553 C1orf64Q8NEQ6 169 aa2.85□□□□□ -1.95
PTPN12-213ENST00000519553 CCDC148Q8NFR7 591 aa2.85□□□□□ -1.95
PTPN12-213ENST00000519553 OR51F2Q8NH61 342 aa2.85□□□□□ -1.95
PTPN12-213ENST00000519553 KCNS3Q9BQ31 491 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms