RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 SFRP4Q6FHJ7 346 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 PGBD2Q6P3X8 592 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 CBLL1Q75N03 491 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 NRMQ8IXM6 262 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 OFCC1Q8IZS5 231 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 LYG1Q8N1E2 194 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 GCSAMQ8N6F7 178 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 OR13C2Q8NGS9 318 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 SLC7A13Q8TCU3 470 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 ST8SIA4Q92187 359 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 BPIFA2Q96DR5 249 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 HCAR1Q9BXC0 346 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 NPFFR1Q9GZQ6 430 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 SLC22A4Q9H015 551 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 HDHD2Q9H0R4 259 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 ZNF702PQ9H963 129 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 UFSP2Q9NUQ7 469 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 MRGBPQ9NV56 204 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 ONECUT1Q9UBC0 465 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 ADAM18Q9Y3Q7 739 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 MEIOCA2RUB1 952 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 RER1O15258 196 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 SNX3O60493 162 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 CCDC22O60826 627 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 DIRAS1O95057 198 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 DUS4LO95620 317 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 IFNA14P01570 189 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 GYPAP02724 150 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 IFNW1P05000 195 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 CTLA4P16410 223 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 MSX2P35548 267 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 GPR4P46093 362 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 FXYD6P3P58550 94 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 CTXN1P60606 82 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 PSME3P61289 254 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 HIST1H3AP68431 136 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 SLC35A2P78381 396 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 ST3GAL3Q11203 375 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 GK2Q14410 553 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 OR8B8Q15620 311 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 LRRC75BQ2VPJ9 315 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 MESTQ5EB52 335 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 HIST2H3PS2Q5TEC6 136 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 HACD2Q6Y1H2 254 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 HIST2H3AQ71DI3 136 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 ARPINQ7Z6K5 226 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 FGFRL1Q8N441 504 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 OR51A7Q8NH64 312 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 RCC1LQ96I51 464 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 AJUBAQ96IF1 538 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 SSX3Q99909 188 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 ADAT1Q9BUB4 502 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 EFCAB1Q9HAE3 211 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 PRPF19Q9UMS4 504 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 V9GYQ6 96 aa6.83□□□□□ -1.32
CTNNA1-215ENST00000519309 TRBV4-1A0A0J9YWV2 114 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 A0A1B0GW55 424 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 PRSS37A4D1T9 235 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 E9PQ18 207 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 M0R1W7 72 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 GMDSO60547 372 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 LHBP01229 141 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 SEMG1P04279 462 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 DUX4L2P0CJ85 424 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 DUX4L3P0CJ86 424 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 DUX4L4P0CJ87 422 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 DUX4L5P0CJ88 424 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 DUX4L6P0CJ89 424 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 DUX4L7P0CJ90 424 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 KRTAP10-11P60412 298 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 PRKCDQ05655 676 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 TRAM2Q15035 370 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 SEC23BQ15437 767 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 OR8G1Q15617 311 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 KCNMB1Q16558 191 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 IFI44LQ53G44 452 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 ZBTB37Q5TC79 503 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 DUX4L9Q6RFH8 374 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 MBOAT2Q6ZWT7 520 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 FAM122BQ7Z309 247 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 PNKDQ8N490 385 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 OR51G2Q8NGK0 314 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 ACOT11Q8WXI4 607 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 FAM46AQ96IP4 442 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 C7orf34Q96L11 122 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 CITED2Q99967 270 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 HOPXQ9BPY8 73 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 KCTD14Q9BQ13 255 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 FUZQ9BT04 418 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 DCTN5Q9BTE1 182 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 FNDC11Q9BVV2 318 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 WNT10AQ9GZT5 417 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 FAM234AQ9H0X4 552 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 MEGF9Q9H1U4 602 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 WDR76Q9H967 626 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 NMNAT1Q9HAN9 279 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 ARL8BQ9NVJ2 186 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 NDUFAF4Q9P032 175 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 DUX4Q9UBX2 424 aa6.82□□□□□ -1.32
CTNNA1-215ENST00000519309 LHFPL6Q9Y693 200 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms