RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 MMP15P51511 669 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 ART1P52961 327 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 FOXG1P55316 489 aaPredicted RBP12.64□□□□□ -0.39
CLN8-204ENST00000519254 PMPCAQ10713 525 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 RAB11BQ15907 218 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 GLT8D1Q68CQ7 371 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 ZNF529Q6P280 563 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 TFAP2EQ6VUC0 442 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 SERPINA12Q8IW75 414 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 CELF2-AS1Q8N7Q2 184 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 ST6GALNAC3Q8NDV1 305 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 OR51D1Q8NGF3 324 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 OR6K3Q8NGY3 331 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 RAB40AQ8WXH6 277 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 RFT1Q96AA3 541 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 SLC22A4Q9H015 551 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 RHBDL2Q9NX52 303 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 MRPS7Q9Y2R9 242 aaKnown RBP12.64□□□□□ -0.39
CLN8-204ENST00000519254 EEF1E1O43324 174 aaKnown RBP12.63□□□□□ -0.39
CLN8-204ENST00000519254 SGCEO43556 437 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 TNFSF13O75888 250 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 IGLV3-1P01715 115 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 PATE4P0C8F1 98 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 ZNF32P17041 273 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 CRYGSP22914 178 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 TIMP3P35625 211 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 ARF1P84077 181 aaKnown RBP12.63□□□□□ -0.39
CLN8-204ENST00000519254 DGCR2P98153 550 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 PITPNAQ00169 270 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 RAB35Q15286 201 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 FBXW9Q5XUX1 488 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 ZNF813Q6ZN06 617 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 ABHD12BQ7Z5M8 362 aaPredicted RBP12.63□□□□□ -0.39
CLN8-204ENST00000519254 ZGRF1Q86YA3 2104 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 SKA3Q8IX90 412 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 FGFBP3Q8TAT2 258 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 FAM3DQ96BQ1 224 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 HAVCR1Q96D42 359 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 S100A16Q96FQ6 103 aaKnown RBP12.63□□□□□ -0.39
CLN8-204ENST00000519254 LYZL4Q96KX0 146 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 ZFP3Q96NJ6 502 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 NEURL2Q9BR09 285 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 HDHD2Q9H0R4 259 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 SLC17A5Q9NRA2 495 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 CGGBP1Q9UFW8 167 aaPredicted RBP12.63□□□□□ -0.39
CLN8-204ENST00000519254 RHBDD3Q9Y3P4 386 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
CLN8-204ENST00000519254 NBEAQ8NFP9 2946 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 LOC390937A0A1W2PQ73 354 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 RPL36A-HNRNPH2H7BZ11 118 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 CTDSPLO15194 276 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 POU3F4P49335 361 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 EFNB2P52799 333 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 CASP6P55212 293 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 C2orf76Q3KRA6 126 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 GLYATL3Q5SZD4 288 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 ZNF774Q6NX45 483 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 YIPF5Q969M3 257 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 PGAM5Q96HS1 289 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 OPN3Q9H1Y3 402 aaPredicted RBP12.62□□□□□ -0.39
CLN8-204ENST00000519254 KCNK15Q9H427 330 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 RABL2AQ9UBK7 228 aaPredicted RBP12.62□□□□□ -0.39
CLN8-204ENST00000519254 PROCRQ9UNN8 238 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 RABL2BQ9UNT1 228 aa12.62□□□□□ -0.39
CLN8-204ENST00000519254 SPTA1P02549 2419 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 A0A096LPE4 126 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 A0A1W2PPZ6 126 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 OR6C6A6NF89 314 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 M0R135 149 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 LYRM1O43325 122 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 GSTZ1O43708 216 aaPredicted RBP12.61□□□□□ -0.39
CLN8-204ENST00000519254 CDK2P24941 298 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 HTR2CP28335 458 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 GNALP38405 381 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 KIR2DL3P43628 341 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 MAP2K3P46734 347 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 SLC6A9P48067 706 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 PTH2RP49190 550 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 PSG4Q00888 419 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 SCRN3Q0VDG4 424 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 STK11Q15831 433 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 KRTAP27-1Q3LI81 207 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 SLC36A2Q495M3 483 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 C1orf100Q5SVJ3 147 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 ZNF57Q68EA5 555 aaPredicted RBP12.61□□□□□ -0.39
CLN8-204ENST00000519254 DOK3Q7L591 496 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 BIVMQ86UB2 503 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 COMMD2Q86X83 199 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 OR1M1Q8NGA1 313 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 OR5D14Q8NGL3 314 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 OR1F12Q8NHA8 337 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 SPTSSAQ969W0 71 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 PPP1R14BQ96C90 147 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 ZNF799Q96GE5 643 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 FAM71F1Q96KD3 344 aaPredicted RBP12.61□□□□□ -0.39
CLN8-204ENST00000519254 WNT5BQ9H1J7 359 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 OSGIN2Q9Y236 505 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 TIMM10BQ9Y5J6 103 aa12.61□□□□□ -0.39
CLN8-204ENST00000519254 A0A0U1RQV5 110 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms