RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 LRRC28Q86X40 367 aaPredicted RBP5.01□□□□□ -1.61
PABPC1-207ENST00000518716 CROCCP3Q8IVE0 287 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 C10orf107Q8IVU9 208 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 GSPT2Q8IYD1 628 aaKnown RBP5.01□□□□□ -1.61
PABPC1-207ENST00000518716 CLIP4Q8N3C7 705 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 TMEM86BQ8N661 226 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 FNDC5Q8NAU1 212 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 OR5AN1Q8NGI8 311 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 LINC01006Q8NI28 216 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 CCL17Q92583 94 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 TAAR8Q969N4 342 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 TIMD4Q96H15 378 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 TXNDC15Q96J42 360 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 SIGLEC11Q96RL6 698 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 FMO2Q99518 471 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 VCXQ9H320 206 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 SAV1Q9H4B6 383 aaPredicted RBP5.01□□□□□ -1.61
PABPC1-207ENST00000518716 SAP30LQ9HAJ7 183 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 PATZ1Q9HBE1 687 aaKnown RBP5.01□□□□□ -1.61
PABPC1-207ENST00000518716 SEPSECSQ9HD40 501 aaKnown RBP5.01□□□□□ -1.61
PABPC1-207ENST00000518716 MAN2C1Q9NTJ4 1040 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 RHBDL2Q9NX52 303 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 SMPD3Q9NY59 655 aaPredicted RBP5.01□□□□□ -1.61
PABPC1-207ENST00000518716 VSX1Q9NZR4 365 aaPredicted RBP5.01□□□□□ -1.61
PABPC1-207ENST00000518716 IFT52Q9Y366 437 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 FIS1Q9Y3D6 152 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 MAB21L2Q9Y586 359 aa5.01□□□□□ -1.61
PABPC1-207ENST00000518716 C5orf63A6NC05 138 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 CBY3A6NI87 242 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 G3V4G9 280 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 TSPAN4O14817 238 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 UBL3O95164 117 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 KRT75O95678 551 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 DHFRP00374 187 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 CCL2P13500 99 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 UQCRBP14927 111 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 IL7RP16871 459 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 MSR1P21757 451 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 CCNOP22674 350 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 GRPRP30550 384 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 RBMXP38159 391 aaKnown RBP5□□□□□ -1.61
PABPC1-207ENST00000518716 RPS5P46782 204 aaKnown RBP5□□□□□ -1.61
PABPC1-207ENST00000518716 CEBPDP49716 269 aaPredicted RBP5□□□□□ -1.61
PABPC1-207ENST00000518716 SPCS3P61009 180 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 RPL15P61313 204 aaKnown RBP5□□□□□ -1.61
PABPC1-207ENST00000518716 TXNL4AP83876 142 aaKnown RBP5□□□□□ -1.61
PABPC1-207ENST00000518716 PMS2P11Q13670 270 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 TIGD6Q17RP2 521 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 DEFB112Q30KQ8 113 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 PGS1Q32NB8 556 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 FAM69AQ5T7M9 428 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 ATG16L1Q676U5 607 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 ZNF836Q6ZNA1 936 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 NET1Q7Z628 596 aaPredicted RBP5□□□□□ -1.61
PABPC1-207ENST00000518716 PXKQ7Z7A4 578 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 VRK2Q86Y07 508 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 PARP8Q8N3A8 854 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 ZNF283Q8N7M2 679 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 SLC30A7Q8NEW0 376 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 OR52E2Q8NGJ4 325 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 OR4A15Q8NGL6 344 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 PPP1R35Q8TAP8 253 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 PNPT1Q8TCS8 783 aaKnown RBP5□□□□□ -1.61
PABPC1-207ENST00000518716 ST7LQ8TDW4 575 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 C10orf82Q8WW14 230 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 LIPHQ8WWY8 451 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 C11orf40Q8WZ69 217 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 TMEM54Q969K7 222 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 SLAMF9Q96A28 289 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 TESCQ96BS2 214 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 MARS2Q96GW9 593 aaKnown RBP5□□□□□ -1.61
PABPC1-207ENST00000518716 EMC6Q9BV81 110 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 CHIAQ9BZP6 476 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 BCL2L14Q9BZR8 327 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 MS4A7Q9GZW8 240 aaPredicted RBP5□□□□□ -1.61
PABPC1-207ENST00000518716 MUC13Q9H3R2 512 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 RMND5AQ9H871 391 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 NOX4Q9NPH5 578 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 SLC6A13Q9NSD5 602 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 IL20RAQ9UHF4 553 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 PUS1Q9Y606 427 aaKnown RBP eCLIP5□□□□□ -1.61
PABPC1-207ENST00000518716 NPTNQ9Y639 398 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 COL7A1Q02388 2944 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 DNAH7Q8WXX0 4024 aa5□□□□□ -1.61
PABPC1-207ENST00000518716 IGHV3OR16-10A0A075B7F0 116 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 A0A087WUJ7 227 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 KIR2DS1A0A191URI9 304 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 H0YL77 283 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 PIN1P1O15428 100 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 ADAM20O43506 726 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 SPRY3O43610 288 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 OR2T1O43869 369 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 RAB36O95755 333 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 GPANK1O95872 356 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 PRB2P02812 416 aaPredicted RBP4.99□□□□□ -1.61
PABPC1-207ENST00000518716 BGLAPP02818 100 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 MT-ND5P03915 603 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 MMP7P09237 267 aaPredicted RBP4.99□□□□□ -1.61
PABPC1-207ENST00000518716 WNT2P09544 360 aa4.99□□□□□ -1.61
PABPC1-207ENST00000518716 OR8G3PP0DMU2 310 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms