RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 H3BMQ9 156 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 SULT2B1O00204 365 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 DFFAO00273 331 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 SULT1C2O00338 296 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 PSTPIP1O43586 416 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 SNAI2O43623 268 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 GMDSO60547 372 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 FCN3O75636 299 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 MMP23AO75900 390 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 UTS2O95399 124 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 KRT75O95678 551 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 LALBAP00709 142 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 SERPINA1P01009 418 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TIMP1P01033 207 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 IFNW1P05000 195 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 RD3LP0DJH9 198 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 KITLGP21583 273 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ME2P23368 584 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 IVDP26440 423 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 CFHR2P36980 270 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TGFBR2P37173 567 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 RBM34P42696 430 aaKnown RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 SLC1A1P43005 524 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TMED10P49755 219 aaKnown RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 KPNA2P52292 529 aaKnown RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ATP5J2P56134 94 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 C1QTNF8P60827 252 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 KLRC3Q07444 240 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 MGAT3Q09327 533 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 SLC10A7Q0GE19 358 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 POU6F1Q14863 301 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 PTGES3Q15185 160 aaKnown RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 PSG5Q15238 335 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 SLC15A2Q16348 729 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 MRPL23Q16540 153 aaKnown RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 WHAMMP3Q1A5X7 153 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TRIM16LQ309B1 348 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 GGTA1PQ4G0N0 100 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 GCSAMLQ5JQS6 135 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 RBM48Q5RL73 367 aaKnown RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TPRG1LQ5T0D9 272 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TRIQKQ629K1 86 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 FAM45BPQ6NSW5 357 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 SPESP1Q6UW49 350 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 FAM131AQ6UXB0 335 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 LRRC31Q6UY01 552 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ZNF621Q6ZSS3 439 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 OR2W3Q7Z3T1 314 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 DHDDSQ86SQ9 333 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 PLA2G4DQ86XP0 818 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 KRTAP11-1Q8IUC1 163 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TRAPPC5Q8IUR0 188 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 BOD1L2Q8IYS8 172 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ZFP82Q8N141 532 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 STK40Q8N2I9 435 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 RIBC1Q8N443 379 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 DHRSXQ8N5I4 330 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TMEM251Q8N6I4 163 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 C12orf29Q8N999 325 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 CCDC54Q8NEL0 328 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 B3GNT7Q8NFL0 401 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 OR2AP1Q8NGE2 309 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 OR1L6Q8NGR2 347 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 OR6K6Q8NGW6 343 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 OR1F12Q8NHA8 337 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 FAM45AQ8TCE6 357 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 MCOLN3Q8TDD5 553 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 NEK7Q8TDX7 302 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 CASTOR1Q8WTX7 329 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 C7orf33Q8WU49 177 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 KCTD4Q8WVF5 259 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 DNAJB3Q8WWF6 145 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 HGDQ93099 445 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 BORCS5Q969J3 196 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 MARC2Q969Z3 335 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ISOC2Q96AB3 205 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ELSPBP1Q96BH3 223 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TCEAL4Q96EI5 215 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 PELI1Q96FA3 418 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 CPB2Q96IY4 423 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 PACRGQ96M98 296 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 Q96MT0 163 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 CLCC1Q96S66 551 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 MBOAT4Q96T53 435 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 RBBP8Q99708 897 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 BEX2Q9BXY8 128 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ULBP1Q9BZM6 244 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 METTL9Q9H1A3 318 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 C1orf198Q9H425 327 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ANKRD19PQ9H560 264 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ZNF385DQ9H6B1 395 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ARMC7Q9H6L4 198 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 WDR55Q9H6Y2 383 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ZDHHC11Q9H8X9 412 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 NMRAL1Q9HBL8 299 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 XPNPEP1Q9NQW7 623 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 SIRT7Q9NRC8 400 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ARMC1Q9NVT9 282 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 VAPAQ9P0L0 249 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 OPN4Q9UHM6 478 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms