RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 HIKESHIQ53FT3 197 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TCTEX1D4Q5JR98 221 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 Q5PR19 223 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM69Q5SWH9 247 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 DCST1Q5T197 706 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 PRAMEF5Q5TYX0 476 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR2G6Q5TZ20 316 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 PRAMEF6Q5VXH4 476 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TCTN3Q6NUS6 607 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM71F2Q6NXP2 309 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 GGT6Q6P531 493 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 OPN5Q6U736 354 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM108Q6UXF1 575 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 NHLRC1Q6VVB1 395 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 MBOAT2Q6ZWT7 520 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 MRPL21Q7Z2W9 205 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 GLT6D1Q7Z4J2 308 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM144Q7Z5S9 345 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 CTU1Q7Z7A3 348 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 DND1Q8IYX4 353 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 MUC20Q8N307 709 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 WDTC1Q8N5D0 677 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TCTEX1D1Q8N7M0 179 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 BOLLQ8N9W6 283 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 NOXO1Q8NFA2 376 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR4K14Q8NGD5 310 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR9K2Q8NGE7 335 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR52L2PQ8NGH6 319 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR51A2Q8NGJ7 313 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR10G4Q8NGN3 311 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR1L6Q8NGR2 347 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR1K1Q8NGR3 316 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR6K2Q8NGY2 324 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR51Q1Q8NH59 317 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 MFSD8Q8NHS3 518 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 Q8TCH9 128 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SFXN5Q8TD22 340 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SECTM1Q8WVN6 248 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMED6Q8WW62 240 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 MIB2Q96AX9 1013 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 ANKRD9Q96BM1 317 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 NSUN4Q96CB9 384 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TIFAQ96CG3 184 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 AJUBAQ96IF1 538 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF75AQ96N20 296 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 LRRC3BQ96PB8 259 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 IP6K3Q96PC2 410 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM110AQ9BQ89 295 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 NIPSNAP3BQ9BS92 247 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 VAMP8Q9BV40 100 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SNRNP25Q9BV90 132 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 KRTAP9-8Q9BYQ0 159 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 BANF2Q9H503 90 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 RERGLQ9H628 205 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SGK2Q9HBY8 427 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 AGO4Q9HCK5 861 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 CISHQ9NSE2 258 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TAS2R16Q9NYV7 291 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC25A37Q9NYZ2 338 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC45A2Q9UMX9 530 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SCML2Q9UQR0 700 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 C14orf166Q9Y224 244 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 GPR52Q9Y2T5 361 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 INSL6Q9Y581 213 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SNX10Q9Y5X0 201 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 STYXL1Q9Y6J8 313 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 ENPP4Q9Y6X5 453 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 WDR81Q562E7 1941 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 A0A0G2JN53 185 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 A6NNC1 897 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 YDJCA8MPS7 323 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 HEPACAM2A8MVW5 462 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 C9JVG2 144 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 FTCDNL1E5RQL4 147 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 G3V4G9 280 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 PYCARD-AS1I3L0S3 204 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 GAPDHSO14556 408 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 XKRYO14609 159 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARPC3O15145 178 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 HMGB3O15347 200 aaKnown RBP4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 GPR39O43194 453 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 TRAF3IP2O43734 574 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 TLX2O43763 284 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 MFSD11O43934 449 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 PCDH7O60245 1069 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 HBP1O60381 514 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 VAMP5O95183 116 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 SMIM10L2AP0DMW4 78 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 SMIM10L2BP0DMW5 78 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR13C7P0DN81 318 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 PF4V1P10720 104 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 CD37P11049 281 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF19P17023 458 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 IL11P20809 199 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 EDNRBP24530 442 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 DPP4P27487 766 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 IL12BP29460 328 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 CEACAM3P40198 252 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 CXCR3P49682 368 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 RND2P52198 227 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms