RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 MSR1P21757 451 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 SRSF5Q13243 272 aaKnown RBP9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR5AS1Q8N127 324 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF768Q9H5H4 540 aaKnown RBP9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 FLRT3Q9NZU0 649 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 FBXO4Q9UKT5 387 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 SHISA7A6NL88 538 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 C1orf196B1AJZ1 125 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 THY1P04216 161 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 ERGP11308 486 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 NME1P15531 152 aaKnown RBP9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 CCL7P80098 99 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 EFNB1P98172 346 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 EBPQ15125 230 aaKnown RBP9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 BPIFCQ8NFQ6 507 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR1J2Q8NGS2 313 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 SLC19A3Q9BZV2 496 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 ARRDC1-AS1Q9H2J1 176 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 PRELID3BQ9Y3B1 194 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 VWA8A3KMH1 1905 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 A0A0G2JK05 382 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 FAM221AA4D161 298 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 SDCBPO00560 298 aaPredicted RBP9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 NAT2P11245 290 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 NAGAP17050 411 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 PI3P19957 117 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 RAB4BP61018 213 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 B3GNTL1Q67FW5 361 aaPredicted RBP9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 H3F3CQ6NXT2 135 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 LPCAT3Q6P1A2 487 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR2I1PQ8NGU4 316 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 S100PBPQ96BU1 408 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 FAM234AQ9H0X4 552 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 TXNIPQ9H3M7 391 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 CRLF2Q9HC73 371 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 GBF1Q92538 1859 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 MFSD2BA6NFX1 497 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 PHF1O43189 567 aaPredicted RBP9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 MED6O75586 246 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 NXPH3O95157 252 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 VAMP5O95183 116 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF728P0DKX0 622 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 GRB2P62993 217 aaKnown RBP9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 FOXF1Q12946 379 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 ACOT7LQ6ZUV0 252 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 SEMA6DQ8NFY4 1073 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 NUDCD2Q8WVJ2 157 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 UNKLQ9H9P5 680 aaKnown RBP9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 DNAJB12Q9NXW2 375 aaKnown RBP9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 LHX6Q9UPM6 363 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 BPTFQ12830 3046 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 LILRA5A6NI73 299 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 TMEM127O75204 238 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 TMIGD3P0DMS9 266 aaPredicted RBP9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 FOLR1P15328 257 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 CLINT1Q14677 625 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF674Q2M3X9 581 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 EMC4Q5J8M3 183 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF610Q8N9Z0 462 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF485Q8NCK3 441 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR10R2Q8NGX6 335 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 SP7Q8TDD2 431 aaPredicted RBP9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 ST8SIA1Q92185 356 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 OCSTAMPQ9BR26 566 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 SLCO5A1Q9H2Y9 848 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 GPR160Q9UJ42 338 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 B3GALT5Q9Y2C3 310 aa9.74□□□□□ -0.85
PCDHGA1-202ENST00000517417 M0R135 149 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 LAP3P28838 519 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 OPRM1P35372 400 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 GUSBP11Q6P575 273 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZAR1Q86SH2 424 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 GLRX5Q86SX6 157 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZFP82Q8N141 532 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 HSD17B11Q8NBQ5 300 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 C2CD4CQ8TF44 421 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 KISS1RQ969F8 398 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF799Q96GE5 643 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 ABHD6Q9BV23 337 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 NMNAT2Q9BZQ4 307 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 TINAGL1Q9GZM7 467 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 TMEM231Q9H6L2 316 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 PCDHB10Q9UN67 800 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 A0A087WUJ7 227 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 RPS10-NUDT3A0A1W2PQS6 291 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 FRG2CA6NGY1 282 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 BCL2L11O43521 198 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 TPPPO94811 219 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 CHRM2P08172 466 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 CNR1P21554 472 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 ABCD3P28288 659 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 EDDM3BP56851 147 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 RAB31Q13636 194 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF273Q14593 569 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 ACTBL2Q562R1 376 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 TMEM217Q8N7C4 229 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR1M1Q8NGA1 313 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 RNF141Q8WVD5 230 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 PPP1R1CQ8WVI7 109 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 KCNK15Q9H427 330 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms