RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 MBD6Q96DN6 1003 aa12.91□□□□□ -0.34
PDCD6-211ENST00000515587 VRK1Q99986 396 aaPredicted RBP12.91□□□□□ -0.34
PDCD6-211ENST00000515587 PBOV1Q9GZY1 135 aa12.91□□□□□ -0.34
PDCD6-211ENST00000515587 MS4A5Q9H3V2 200 aa12.91□□□□□ -0.34
PDCD6-211ENST00000515587 FAM206AQ9NX38 181 aa12.91□□□□□ -0.34
PDCD6-211ENST00000515587 PURGQ9UJV8 347 aaKnown RBP12.91□□□□□ -0.34
PDCD6-211ENST00000515587 BLOC1S6Q9UL45 172 aa12.91□□□□□ -0.34
PDCD6-211ENST00000515587 PTGES3LE9PB15 166 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 H7C417 338 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 OVOL3O00110 214 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 ADRA2AP08913 450 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 CCDC159P0C7I6 412 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 ALDH3B1P43353 468 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 ZNF92Q03936 586 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 MRPL28Q13084 256 aaKnown RBP12.9□□□□□ -0.34
PDCD6-211ENST00000515587 DEFB113Q30KQ7 82 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 ALKBH6Q3KRA9 238 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 RBM48Q5RL73 367 aaKnown RBP12.9□□□□□ -0.34
PDCD6-211ENST00000515587 PRSS45Q7RTY3 260 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 KLHL36Q8N4N3 616 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 OR8B12Q8NGG6 310 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 SPRYD4Q8WW59 207 aaPredicted RBP12.9□□□□□ -0.34
PDCD6-211ENST00000515587 IGFBPL1Q8WX77 278 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 REEP6Q96HR9 211 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 C4orf36Q96KX1 117 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 RHNO1Q9BSD3 238 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 RAB1BQ9H0U4 201 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 ACOXLQ9NUZ1 547 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 MYEF2Q9P2K5 600 aaKnown RBP12.9□□□□□ -0.34
PDCD6-211ENST00000515587 NUFIP1Q9UHK0 495 aaKnown RBP12.9□□□□□ -0.34
PDCD6-211ENST00000515587 OR52A1Q9UKL2 312 aa12.9□□□□□ -0.34
PDCD6-211ENST00000515587 ARID1AO14497 2285 aa12.9□□□□□ -0.35
PDCD6-211ENST00000515587 PRRC2AP48634 2157 aaKnown RBP12.89□□□□□ -0.35
PDCD6-211ENST00000515587 A0A0U1RQV5 110 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 HTR1AP08908 422 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 LIMS3P0CW19 117 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 LIMS4P0CW20 117 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 ETV1P50549 477 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 ZNF81P51508 661 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 GBX2P52951 348 aaPredicted RBP12.89□□□□□ -0.35
PDCD6-211ENST00000515587 OR12D2P58182 307 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 MFGE8Q08431 387 aaPredicted RBP12.89□□□□□ -0.35
PDCD6-211ENST00000515587 OR2T2Q6IF00 324 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 SPSB4Q96A44 273 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 SGK3Q96BR1 496 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 SIGLEC11Q96RL6 698 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 MDFIQ99750 246 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 BARX1Q9HBU1 254 aaPredicted RBP12.89□□□□□ -0.35
PDCD6-211ENST00000515587 FKBP14Q9NWM8 211 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 CAB39Q9Y376 341 aaPredicted RBP12.89□□□□□ -0.35
PDCD6-211ENST00000515587 USF3Q68DE3 2245 aa12.89□□□□□ -0.35
PDCD6-211ENST00000515587 ZNF469Q96JG9 3925 aaPredicted RBP12.88□□□□□ -0.35
PDCD6-211ENST00000515587 IQCF6A8MYZ5 107 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 MYL12BO14950 172 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 SRSF10O75494 262 aaKnown RBP12.88□□□□□ -0.35
PDCD6-211ENST00000515587 PNPP00491 289 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 CDK1P06493 297 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 NAT2P11245 290 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 PAX1P15863 534 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 TNFSF4P23510 183 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 DDOSTP39656 456 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 PSMB10P40306 273 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 PTH2RP49190 550 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 ATP5J2P56134 94 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 PCGF3Q3KNV8 242 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 CATSPERDQ86XM0 798 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 OR5AS1Q8N127 324 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 FTMTQ8N4E7 242 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 BHLHE23Q8NDY6 225 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 RORBQ92753 470 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 ITFG2Q969R8 447 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 PERPQ96FX8 193 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 DIRC2Q96SL1 478 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 GSX2Q9BZM3 304 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 ISG20L2Q9H9L3 353 aaKnown RBP12.88□□□□□ -0.35
PDCD6-211ENST00000515587 G6PC2Q9NQR9 355 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 ZNF701Q9NV72 531 aaPredicted RBP12.88□□□□□ -0.35
PDCD6-211ENST00000515587 ZDHHC8Q9ULC8 765 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 ERGIC3Q9Y282 383 aa12.88□□□□□ -0.35
PDCD6-211ENST00000515587 NOP16Q9Y3C1 178 aaKnown RBP12.88□□□□□ -0.35
PDCD6-211ENST00000515587 C5orf63A6NC05 138 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 CD300LBA8K4G0 201 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 C17orf100A8MU93 164 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 TPD52L2O43399 206 aaKnown RBP12.87□□□□□ -0.35
PDCD6-211ENST00000515587 MTRF1O75570 445 aaKnown RBP12.87□□□□□ -0.35
PDCD6-211ENST00000515587 CRHBPP24387 322 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 EEF1B2P24534 225 aaKnown RBP12.87□□□□□ -0.35
PDCD6-211ENST00000515587 MMP15P51511 669 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 FDX2Q6P4F2 183 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 ELMOD2Q8IZ81 293 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 LRRC75A-AS1Q8N1F1 130 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 CSNK2A3Q8NEV1 391 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 OR8G5Q8NG78 346 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 OR13G1Q8NGZ3 307 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 OR52N1Q8NH53 320 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 OR51E1Q8TCB6 317 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 NEU4Q8WWR8 484 aaPredicted RBP12.87□□□□□ -0.35
PDCD6-211ENST00000515587 PELI1Q96FA3 418 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 TPK1Q9H3S4 243 aa12.87□□□□□ -0.35
PDCD6-211ENST00000515587 TMEM100Q9NV29 134 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms