RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 GPR50Q13585 617 aa18.01■□□□□ 0.47
LSM6-207ENST00000515311 HLXQ14774 488 aaPredicted RBP18.01■□□□□ 0.47
LSM6-207ENST00000515311 GFOD2Q3B7J2 385 aa18.01■□□□□ 0.47
LSM6-207ENST00000515311 TMEM244Q5VVB8 128 aa18.01■□□□□ 0.47
LSM6-207ENST00000515311 KCTD8Q6ZWB6 473 aa18.01■□□□□ 0.47
LSM6-207ENST00000515311 PGAP1Q75T13 922 aa18.01■□□□□ 0.47
LSM6-207ENST00000515311 OR5AK2Q8NH90 309 aa18.01■□□□□ 0.47
LSM6-207ENST00000515311 SYNPRQ8TBG9 265 aa18.01■□□□□ 0.47
LSM6-207ENST00000515311 MRPL24Q96A35 216 aaKnown RBP18.01■□□□□ 0.47
LSM6-207ENST00000515311 MARVELD3Q96A59 401 aa18.01■□□□□ 0.47
LSM6-207ENST00000515311 HAVCR1Q96D42 359 aa18.01■□□□□ 0.47
LSM6-207ENST00000515311 COMMD4Q9H0A8 199 aa18.01■□□□□ 0.47
LSM6-207ENST00000515311 GPR84Q9NQS5 396 aa18.01■□□□□ 0.47
LSM6-207ENST00000515311 CENPEQ02224 2701 aa18■□□□□ 0.47
LSM6-207ENST00000515311 IGLV3-9A0A075B6K5 115 aa18■□□□□ 0.47
LSM6-207ENST00000515311 hCG_38984A0A1B0GV85 526 aa18■□□□□ 0.47
LSM6-207ENST00000515311 LOC390937A0A1W2PQ73 354 aa18■□□□□ 0.47
LSM6-207ENST00000515311 OR4A8P0C604 315 aa18■□□□□ 0.47
LSM6-207ENST00000515311 SELEP16581 610 aa18■□□□□ 0.47
LSM6-207ENST00000515311 CELP19835 753 aa18■□□□□ 0.47
LSM6-207ENST00000515311 SERPINF1P36955 418 aa18■□□□□ 0.47
LSM6-207ENST00000515311 EVX1P49640 407 aa18■□□□□ 0.47
LSM6-207ENST00000515311 FABP6P51161 128 aa18■□□□□ 0.47
LSM6-207ENST00000515311 KLF3P57682 345 aaPredicted RBP18■□□□□ 0.47
LSM6-207ENST00000515311 TPBGQ13641 420 aa18■□□□□ 0.47
LSM6-207ENST00000515311 EFNB3Q15768 340 aa18■□□□□ 0.47
LSM6-207ENST00000515311 MSMPQ1L6U9 139 aa18■□□□□ 0.47
LSM6-207ENST00000515311 Q6ZSR3 168 aa18■□□□□ 0.47
LSM6-207ENST00000515311 COMMD2Q86X83 199 aa18■□□□□ 0.47
LSM6-207ENST00000515311 ZNF676Q8N7Q3 588 aa18■□□□□ 0.47
LSM6-207ENST00000515311 PLPP7Q8NBV4 271 aa18■□□□□ 0.47
LSM6-207ENST00000515311 CCDC54Q8NEL0 328 aa18■□□□□ 0.47
LSM6-207ENST00000515311 CMBLQ96DG6 245 aa18■□□□□ 0.47
LSM6-207ENST00000515311 LYZL4Q96KX0 146 aa18■□□□□ 0.47
LSM6-207ENST00000515311 OPALINQ96PE5 141 aa18■□□□□ 0.47
LSM6-207ENST00000515311 FAIMQ9NVQ4 179 aa18■□□□□ 0.47
LSM6-207ENST00000515311 A0A1B0GTI1 187 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 LOC107986453A0A1B0GWG9 222 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 P2RY10O00398 339 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 IGHV3-13P01766 116 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 HSMCR30P0CW71 290 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 ATP6V1B1P15313 513 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 CPEP16870 476 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 KITLGP21583 273 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 ACHEP22303 614 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 MPV17P39210 176 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 SELENOVP59797 346 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 FAM3AP98173 230 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 PSG7Q13046 419 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 OR8B8Q15620 311 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 DOK3Q7L591 496 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 TMEM200AQ86VY9 491 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 ZNF611Q8N823 705 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 ZFP41Q8N8Y5 198 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 GHSRQ92847 366 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 UFD1Q92890 307 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 PGLYRP3Q96LB9 341 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 PDCD1LG2Q9BQ51 273 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 MRPS26Q9BYN8 205 aaKnown RBP17.99■□□□□ 0.47
LSM6-207ENST00000515311 MRPL37Q9BZE1 423 aaKnown RBP17.99■□□□□ 0.47
LSM6-207ENST00000515311 PLK3Q9H4B4 646 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 FZR1Q9UM11 496 aa17.99■□□□□ 0.47
LSM6-207ENST00000515311 CELSR2Q9HCU4 2923 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 A0A1B0GVI7 797 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 DHRS7CA6NNS2 312 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 MTRF1O75570 445 aaKnown RBP17.98■□□□□ 0.47
LSM6-207ENST00000515311 DHRS3O75911 302 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 ZNF12P17014 697 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 CD53P19397 219 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 TTKP33981 857 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 DDOSTP39656 456 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 GSK3AP49840 483 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 SLC3A1Q07837 685 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 NEDD8Q15843 81 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 ODF4Q2M2E3 257 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 SYT6Q5T7P8 510 aaPredicted RBP17.98■□□□□ 0.47
LSM6-207ENST00000515311 FBXL14Q8N1E6 418 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 MUL1Q969V5 352 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 PLEKHF2Q9H8W4 249 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 DUSP13Q9UII6 198 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 PURGQ9UJV8 347 aaKnown RBP17.98■□□□□ 0.47
LSM6-207ENST00000515311 HHLA2Q9UM44 414 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 ZNF281Q9Y2X9 895 aa17.98■□□□□ 0.47
LSM6-207ENST00000515311 IQCF6A8MYZ5 107 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 SYT7O43581 403 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 INMTO95050 263 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 JUNBP17275 347 aaPredicted RBP17.97■□□□□ 0.47
LSM6-207ENST00000515311 PSMB9P28065 219 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 MOGQ16653 247 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 ARMCX4Q5H9R4 360 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 TMEM255AQ5JRV8 349 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 LRP11Q86VZ4 500 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 RDH10Q8IZV5 341 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 MUC15Q8N387 334 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 FAM71F1Q96KD3 344 aaPredicted RBP17.97■□□□□ 0.47
LSM6-207ENST00000515311 SYT3Q9BQG1 590 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 UBTD1Q9HAC8 227 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 CGGBP1Q9UFW8 167 aaPredicted RBP17.97■□□□□ 0.47
LSM6-207ENST00000515311 V9GYS6 101 aa17.97■□□□□ 0.47
LSM6-207ENST00000515311 LRBAP50851 2863 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms