RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 F5H5K5 113 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.89□□□□□ -0.99
DDX41-216ENST00000513562 M0R1W7 72 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 IMPA2O14732 288 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 GRPP07492 148 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 MUC1P15941 1255 aaPredicted RBP8.89□□□□□ -0.99
DDX41-216ENST00000513562 MSX2P35548 267 aaPredicted RBP8.89□□□□□ -0.99
DDX41-216ENST00000513562 PRKCDQ05655 676 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 HABP2Q14520 560 aaPredicted RBP8.89□□□□□ -0.99
DDX41-216ENST00000513562 MEP1BQ16820 701 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 PCK2Q16822 640 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 MICBQ29980 383 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 CORO6Q6QEF8 472 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 SLC36A1Q7Z2H8 476 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 OR10A6Q8NH74 314 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 PRRC1Q96M27 445 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 EBF4Q9BQW3 602 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 CCDC28BQ9BUN5 200 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 MEGF9Q9H1U4 602 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 NMNAT1Q9HAN9 279 aaPredicted RBP8.89□□□□□ -0.99
DDX41-216ENST00000513562 RPS6KA6Q9UK32 745 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 A4GNTQ9UNA3 340 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 NDUFAF1Q9Y375 327 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 CDC42EP2O14613 210 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 ACOT8O14734 319 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 NDUFB3O43676 98 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 LCATP04180 440 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 FAHP16930 419 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 SDHAP31040 664 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 TGM4P49221 684 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 IDH3AP50213 366 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 SLC35A2P78381 396 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 EGFEM1PQ0D2K5 195 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 TRAP1Q12931 704 aaKnown RBP8.88□□□□□ -0.99
DDX41-216ENST00000513562 ECH1Q13011 328 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 IKZF1Q13422 519 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 HCP5Q6MZN7 132 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 CFAP77Q6ZQR2 320 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 ADCK1Q86TW2 530 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 NAA40Q86UY6 237 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 PIFOQ8TCI5 191 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 C12orf43Q96C57 262 aaKnown RBP8.88□□□□□ -0.99
DDX41-216ENST00000513562 WNT10AQ9GZT5 417 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 NUAK2Q9H093 628 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 RNPEPL1Q9HAU8 725 aa8.88□□□□□ -0.99
DDX41-216ENST00000513562 SF3B6Q9Y3B4 125 aaKnown RBP8.88□□□□□ -0.99
DDX41-216ENST00000513562 AMY2BP19961 511 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 PAX6P26367 422 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 MDH1P40925 334 aaKnown RBP8.87□□□□□ -0.99
DDX41-216ENST00000513562 GPR4P46093 362 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 BMXP51813 675 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 SLC18A1P54219 525 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 ZNF92Q03936 586 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 MZT1Q08AG7 82 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 ZBED5Q49AG3 693 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 LRRC10Q5BKY1 277 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 SLC18B1Q6NT16 456 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 PTCHD4Q6ZW05 846 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.87□□□□□ -0.99
DDX41-216ENST00000513562 C11orf53Q8IXP5 236 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 OFCC1Q8IZS5 231 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 LRRC29Q8WV35 223 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 RCC1LQ96I51 464 aaKnown RBP8.87□□□□□ -0.99
DDX41-216ENST00000513562 GPX7Q96SL4 187 aaPredicted RBP8.87□□□□□ -0.99
DDX41-216ENST00000513562 DDOQ99489 341 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 PITX2Q99697 317 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 NKX3-1Q99801 234 aaPredicted RBP8.87□□□□□ -0.99
DDX41-216ENST00000513562 ATF6BQ99941 703 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 NDEL1Q9GZM8 345 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 PNRC2Q9NPJ4 139 aaKnown RBP8.87□□□□□ -0.99
DDX41-216ENST00000513562 NRIP3Q9NQ35 241 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 C14orf119Q9NWQ9 140 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 ADA2Q9NZK5 511 aa8.87□□□□□ -0.99
DDX41-216ENST00000513562 IGLV1-36A0A0B4J1U3 117 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.86□□□□□ -0.99
DDX41-216ENST00000513562 GGT3PA6NGU5 568 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 E9PQ18 207 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 C3orf84H3BNL1 204 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 M0R135 149 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 DCTN6O00399 190 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 BHLHE40O14503 412 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 ANGPT2O15123 496 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 DUS4LO95620 317 aaKnown RBP8.86□□□□□ -0.99
DDX41-216ENST00000513562 SELLP14151 372 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 ANOS1P23352 680 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 IFNA8P32881 189 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 GRK5P34947 590 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 GGT2P36268 569 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 NFYCQ13952 458 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 SNAI3Q3KNW1 292 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 ATPAF1Q5TC12 328 aaPredicted RBP8.86□□□□□ -0.99
DDX41-216ENST00000513562 STUMQ69YW2 141 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 GPR139Q6DWJ6 353 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 WDR82Q6UXN9 313 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 TMPRSS11FQ6ZWK6 438 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 MBOAT2Q6ZWT7 520 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 TSEN54Q7Z6J9 526 aaKnown RBP8.86□□□□□ -0.99
DDX41-216ENST00000513562 WDR86Q86TI4 376 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 RNF113BQ8IZP6 322 aaKnown RBP8.86□□□□□ -0.99
DDX41-216ENST00000513562 SLC26A10Q8NG04 563 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms