RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 DUX4L3P0CJ86 424 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 DUX4L4P0CJ87 422 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 DUX4L5P0CJ88 424 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 DUX4L6P0CJ89 424 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 DUX4L7P0CJ90 424 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 FPR3P25089 353 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 PAX6P26367 422 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 SAA4P35542 130 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 GPR4P46093 362 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 LCN6P62502 163 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 HABP2Q14520 560 aaPredicted RBP9.11□□□□□ -0.95
RNF4-218ENST00000513284 LY6EQ16553 131 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 CCDC92Q53HC0 331 aaPredicted RBP9.11□□□□□ -0.95
RNF4-218ENST00000513284 MESTQ5EB52 335 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 DUX4L9Q6RFH8 374 aaPredicted RBP9.11□□□□□ -0.95
RNF4-218ENST00000513284 VTCN1Q7Z7D3 282 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 CELF2-AS1Q8N7Q2 184 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 SPERTQ8NA61 448 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 GJC3Q8NFK1 279 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 OR4F17Q8NGA8 305 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 OR1F12Q8NHA8 337 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 PIFOQ8TCI5 191 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 RORBQ92753 470 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 FAM162AQ96A26 154 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 APOBEC3DQ96AK3 386 aaPredicted RBP9.11□□□□□ -0.95
RNF4-218ENST00000513284 OR4F4Q96R69 305 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 HCAR1Q9BXC0 346 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 SYT4Q9H2B2 425 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 RERGLQ9H628 205 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 WDR76Q9H967 626 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 NMNAT1Q9HAN9 279 aaPredicted RBP9.11□□□□□ -0.95
RNF4-218ENST00000513284 RNF7Q9UBF6 113 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 DUX4Q9UBX2 424 aa9.11□□□□□ -0.95
RNF4-218ENST00000513284 CAB39Q9Y376 341 aaPredicted RBP9.11□□□□□ -0.95
RNF4-218ENST00000513284 NOP16Q9Y3C1 178 aaKnown RBP9.11□□□□□ -0.95
RNF4-218ENST00000513284 LYSTQ99698 3801 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 C3orf84H3BNL1 204 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 J3KTA2 159 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 CHST1O43916 411 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 CCDC22O60826 627 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 ECDO95905 644 aaPredicted RBP9.1□□□□□ -0.95
RNF4-218ENST00000513284 SERPINA1P01009 418 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 H1F0P07305 194 aaKnown RBP9.1□□□□□ -0.95
RNF4-218ENST00000513284 CTLA4P16410 223 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 CD33P20138 364 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 MDH1P40925 334 aaKnown RBP9.1□□□□□ -0.95
RNF4-218ENST00000513284 CD200P41217 278 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 CENPAP49450 140 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 LIPEQ05469 1076 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 EGFEM1PQ0D2K5 195 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 KRT72Q14CN4 511 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 KCNJ8Q15842 424 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 SLC36A3Q495N2 470 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 FGD3Q5JSP0 725 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 FAM122BQ7Z309 247 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 FAM90A1Q86YD7 464 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 BOLLQ8N9W6 283 aaKnown RBP9.1□□□□□ -0.95
RNF4-218ENST00000513284 PAPD5Q8NDF8 572 aaKnown RBP9.1□□□□□ -0.95
RNF4-218ENST00000513284 BEND2Q8NDZ0 799 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 OR4C13Q8NGP0 309 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 OR11L1Q8NGX0 322 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 OR2T6Q8NHC8 308 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 ERGIC1Q969X5 290 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 RCN3Q96D15 328 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 HSH2DQ96JZ2 352 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 GPX7Q96SL4 187 aaPredicted RBP9.1□□□□□ -0.95
RNF4-218ENST00000513284 COQ7Q99807 217 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 SSX3Q99909 188 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 MED4Q9NPJ6 270 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 COA3Q9Y2R0 106 aaPredicted RBP9.1□□□□□ -0.95
RNF4-218ENST00000513284 ADAM18Q9Y3Q7 739 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 ENPP4Q9Y6X5 453 aa9.1□□□□□ -0.95
RNF4-218ENST00000513284 A0A1W2PRQ8 180 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 MEIOCA2RUB1 952 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 CDC42EP2O14613 210 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 NDUFA2O43678 99 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 PTBP3O95758 552 aaKnown RBP9.09□□□□□ -0.95
RNF4-218ENST00000513284 RENP00797 406 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 LHBP01229 141 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 ZNF26P17031 533 aaPredicted RBP9.09□□□□□ -0.95
RNF4-218ENST00000513284 RHCEP18577 417 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 SMIM11AP58511 58 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 MALLQ13021 153 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 FHL1Q13642 323 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 DGCR6Q14129 220 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 C11orf91Q3C1V1 193 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 HSP90B2PQ58FF3 399 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 HCP5Q6MZN7 132 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 DPY19L2P2Q6ZN68 376 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 COLCA1Q6ZS62 124 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 SLC15A3Q8IY34 581 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 FAM46AQ96IP4 442 aaKnown RBP9.09□□□□□ -0.95
RNF4-218ENST00000513284 KCTD14Q9BQ13 255 aaPredicted RBP9.09□□□□□ -0.95
RNF4-218ENST00000513284 SLC22A4Q9H015 551 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 RANBP3Q9H6Z4 567 aaPredicted RBP9.09□□□□□ -0.95
RNF4-218ENST00000513284 ZNF702PQ9H963 129 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 EFCAB1Q9HAE3 211 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 NRIP3Q9NQ35 241 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 CMTM6Q9NX76 183 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 VSX1Q9NZR4 365 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms