RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 TIMM9Q9Y5J7 89 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 MEIOCA2RUB1 952 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 LRRC3CA6NJW4 275 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 APEHP13798 732 aaKnown RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 SKP2Q13309 424 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 SLC25A35Q3KQZ1 300 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 OR10P1Q8NGE3 313 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 CMBLQ96DG6 245 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 SLC29A1Q99808 456 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 TMEM208Q9BTX3 173 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 PTDSS2Q9BVG9 487 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 ZNF665Q9H7R5 613 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 TMEM30AQ9NV96 361 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 PPP1R3CQ9UQK1 317 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 I3L521 148 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 HAX1O00165 279 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 PRR35P0CG20 571 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 HIST1H1CP16403 213 aaKnown RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 SRMP19623 302 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 IGFBP6P24592 240 aaPredicted RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 SLC25A1P53007 311 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 ZNF121P58317 390 aaPredicted RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 ZNF273Q14593 569 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 OR2G6Q5TZ20 316 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 OR51J1Q9H342 316 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 IKZF5Q9H5V7 419 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 SEBOXQ9HB31 216 aaPredicted RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 GALNT9Q9HCQ5 603 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 TAS2R4Q9NYW5 299 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 TMEM8BA6NDV4 472 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 ARRDC5A6NEK1 342 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 AQP7O14520 342 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 SMIM17P0DL12 118 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 FOSL1P15407 271 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 NKX2-1P43699 371 aaPredicted RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 NCS1P62166 190 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 TLE1Q04724 770 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 AGERQ15109 404 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 EBPQ15125 230 aaKnown RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 PNLIPRP3Q17RR3 467 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 PABPC1L2AQ5JQF8 200 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 MRGPRGQ86SM5 289 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 FAM26EQ8N5C1 309 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 DNAJC5GQ8N7S2 189 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 FRZBQ92765 325 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 KTI12Q96EK9 354 aaPredicted RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 C4orf45Q96LM5 186 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 NMES1Q9C002 83 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 SLC23A1Q9UHI7 598 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 PITPNC1Q9UKF7 332 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 ITGB4P16144 1822 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 PRR19A6NJB7 356 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 ZFP92A6NM28 416 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 ZNF701M0R085 212 aaPredicted RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 GMDSO60547 372 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 NGFP01138 241 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 MBP02144 154 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 SCG5P05408 212 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 CRHP06850 196 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 OR5G3P0C626 314 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 COX7A1P24310 79 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 PAX6P26367 422 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 CA5AP35218 305 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 MAGEA5P43359 124 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 DAPP51397 102 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 RPS27AP62979 156 aaKnown RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 UBA52P62987 128 aaKnown RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 PRICKLE4Q2TBC4 344 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 GAB4Q2WGN9 574 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 OR2T2Q6IF00 324 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 ZNF425Q6IV72 752 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 APOOLQ6UXV4 268 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 IDO2Q6ZQW0 420 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 SLC25A42Q86VD7 318 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 BEST4Q8NFU0 473 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 OR51H1Q8NH63 302 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 PTPMT1Q8WUK0 201 aaPredicted RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 BSCL2Q96G97 398 aaPredicted RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 DDOQ99489 341 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 A0A0U1RQK1 487 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 A0A1B0GTH9 108 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 C20orf202A1L168 122 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 HPNP05981 417 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 ZNF14P17017 642 aaPredicted RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 FUT3P21217 361 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 PTBP1P26599 531 aaKnown RBP eCLIP3.81□□□□□ -1.8
VCAN-209ENST00000513016 ARNTP27540 789 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 PSMB3P49720 205 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 ZNF141Q15928 474 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 KCNMB1Q16558 191 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 KRBOX4Q5JUW0 171 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 KDM4DQ6B0I6 523 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 CORO6Q6QEF8 472 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 B3GNT8Q7Z7M8 397 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 SMAP2Q8WU79 429 aaPredicted RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 WNT2BQ93097 391 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 ADAM19Q9H013 955 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 BANF2Q9H503 90 aa3.81□□□□□ -1.8
VCAN-209ENST00000513016 SIRT3Q9NTG7 399 aaPredicted RBP3.81□□□□□ -1.8
VCAN-209ENST00000513016 STRAPQ9Y3F4 350 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms