RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 RPUSD4Q96CM3 377 aaKnown RBP3.37□□□□□ -1.87
CHD1-209ENST00000512844 MICU1Q9BPX6 476 aa3.37□□□□□ -1.87
CHD1-209ENST00000512844 ECSITQ9BQ95 431 aa3.37□□□□□ -1.87
CHD1-209ENST00000512844 ARMC7Q9H6L4 198 aa3.37□□□□□ -1.87
CHD1-209ENST00000512844 WDR54Q9H977 334 aa3.37□□□□□ -1.87
CHD1-209ENST00000512844 IMP3Q9NV31 184 aaKnown RBP3.37□□□□□ -1.87
CHD1-209ENST00000512844 STMN3Q9NZ72 180 aa3.37□□□□□ -1.87
CHD1-209ENST00000512844 MRM2Q9UI43 246 aaKnown RBP3.37□□□□□ -1.87
CHD1-209ENST00000512844 MAP3K5Q99683 1374 aa3.37□□□□□ -1.87
CHD1-209ENST00000512844 NOTCH2Q04721 2471 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 IFT172Q9UG01 1749 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 ATP7BP35670 1465 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 CDK12Q9NYV4 1490 aaPredicted RBP3.36□□□□□ -1.87
CHD1-209ENST00000512844 NACAE9PAV3 2078 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 A0A1W2PPV9 198 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 F8VP50 259 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 KLRC4-KLRK1H3BQV0 150 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 DCTN6O00399 190 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 HCRTR1O43613 425 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 GMDSO60547 372 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 PFKFB2O60825 505 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 GAPDHP04406 335 aaKnown RBP3.36□□□□□ -1.87
CHD1-209ENST00000512844 ICAM2P13598 275 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 ADRB3P13945 408 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 PSMC3P17980 439 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 RCC1P18754 421 aaPredicted RBP3.36□□□□□ -1.87
CHD1-209ENST00000512844 IL12AP29459 219 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 MAP3K8P41279 467 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 TMED10P49755 219 aaKnown RBP3.36□□□□□ -1.87
CHD1-209ENST00000512844 POLR2GP62487 172 aaKnown RBP eCLIP3.36□□□□□ -1.87
CHD1-209ENST00000512844 EBI3Q14213 229 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 NDUFAF6Q330K2 333 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 NSUN5P1Q3KNT7 163 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 KLF17Q5JT82 389 aaPredicted RBP3.36□□□□□ -1.87
CHD1-209ENST00000512844 PPM1LQ5SGD2 360 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 OR2G6Q5TZ20 316 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 COX15Q7KZN9 410 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 ABHD13Q7L211 337 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 NIPA1Q7RTP0 329 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 TRAM1L1Q8N609 369 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 NKAPP1Q8N9T2 125 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 ZNF738Q8NE65 137 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 OR52E5Q8NH55 327 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 OR5AK3PQ8NH89 298 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 PLPPR1Q8TBJ4 325 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 ACER1Q8TDN7 264 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 RNF133Q8WVZ7 376 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 CHCHD10Q8WYQ3 142 aaPredicted RBP3.36□□□□□ -1.87
CHD1-209ENST00000512844 CDS1Q92903 461 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.36□□□□□ -1.87
CHD1-209ENST00000512844 CMTM5Q96DZ9 223 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 SNF8Q96H20 258 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 COPS4Q9BT78 406 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 SLC17A9Q9BYT1 436 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 UCK2Q9BZX2 261 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 ACTR3CQ9C0K3 210 aaPredicted RBP3.36□□□□□ -1.87
CHD1-209ENST00000512844 DEFB129Q9H1M3 183 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 C6orf50Q9HD87 102 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 SLC40A1Q9NP59 571 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 DDX19AQ9NUU7 478 aaKnown RBP3.36□□□□□ -1.87
CHD1-209ENST00000512844 NECAP2Q9NVZ3 263 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 C1orf109Q9NX04 203 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 PAQR5Q9NXK6 330 aaPredicted RBP3.36□□□□□ -1.87
CHD1-209ENST00000512844 VAPAQ9P0L0 249 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 C3orf18Q9UK00 162 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 POLR3HQ9Y535 204 aaPredicted RBP3.36□□□□□ -1.87
CHD1-209ENST00000512844 HECW2Q9P2P5 1572 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 UBN2Q6ZU65 1347 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 RAD50Q92878 1312 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 ZC3H13Q5T200 1668 aaKnown RBP3.36□□□□□ -1.87
CHD1-209ENST00000512844 ARHGEF10O15013 1369 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 KIAA0232Q92628 1395 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 ANKRD26Q9UPS8 1709 aa3.36□□□□□ -1.87
CHD1-209ENST00000512844 NEXMIFQ5QGS0 1516 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 GLI2P10070 1586 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 UGGT1Q9NYU2 1555 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 IGKV2-28A0A075B6P5 120 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 A0A1B0GUS0 222 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 A6NIZ1 184 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 OR5K4A6NMS3 321 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 TRDCB7Z8K6 153 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 CLDN34H7C241 214 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 GOSR2O14653 212 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 AQP9O43315 295 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 SNAI2O43623 268 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 CXCL13O43927 109 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 UGT1A9O60656 530 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 TOM1O60784 492 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 SEMA3DO95025 777 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 PLEKHA8P1O95397 391 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 PSMG1O95456 288 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 RAB3DO95716 219 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 IGKV2D-28P01615 120 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 IFNA6P05013 189 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 IL6P05231 212 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 GOLGA8HP0CJ92 632 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 GIMD1P0DJR0 217 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 NPR2P20594 1047 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 MAGP20916 626 aa3.35□□□□□ -1.87
CHD1-209ENST00000512844 CALCRP30988 508 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms