RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SLC35E4Q6ICL7 350 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 TCTN3Q6NUS6 607 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 TBPL2Q6SJ96 375 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 OR10J6PQ8NGY7 276 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 EXTL1Q92935 676 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 ASB16Q96NS5 453 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 NMNAT3Q96T66 252 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 DOK5Q9P104 306 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 TRAPPC4Q9Y296 219 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 KPTNQ9Y664 436 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 OPRD1P41143 372 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 CDX1P47902 265 aaPredicted RBP8.08□□□□□ -1.12
VCAN-208ENST00000512590 STARD6P59095 220 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 FUT7Q11130 342 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 HERPUD1Q15011 391 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 THEM4Q5T1C6 240 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 LHX8Q68G74 356 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 NHLRC1Q6VVB1 395 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 SLC16A12Q6ZSM3 486 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 C5orf17Q8NAS9 161 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 ERGIC1Q969X5 290 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 ZG16BQ96DA0 208 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 NUDT16L1Q9BRJ7 211 aaKnown RBP8.08□□□□□ -1.12
VCAN-208ENST00000512590 SDR39U1Q9NRG7 319 aaPredicted RBP8.08□□□□□ -1.12
VCAN-208ENST00000512590 GAB2Q9UQC2 676 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 K7ESM1 405 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 CNR1P21554 472 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 USF1P22415 310 aaPredicted RBP8.07□□□□□ -1.12
VCAN-208ENST00000512590 PMP22Q01453 160 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 RPEL1Q2QD12 228 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 NUDT10Q8NFP7 164 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 NUDT11Q96G61 164 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 SSU72Q9NP77 194 aaKnown RBP8.07□□□□□ -1.12
VCAN-208ENST00000512590 IGLV3-22A0A075B6J6 115 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 A6NIN4 97 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 M0QZQ0 153 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 ZNF688P0C7X2 276 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 FTH1P19P0C7X4 201 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 GABRB3P28472 473 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 NKX2-1P43699 371 aaPredicted RBP8.07□□□□□ -1.12
VCAN-208ENST00000512590 ZXDCQ2QGD7 858 aaPredicted RBP8.07□□□□□ -1.12
VCAN-208ENST00000512590 TMEM236Q5W0B7 351 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 C18orf63Q68DL7 685 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 Q8IYB0 196 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 OPALINQ96PE5 141 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 RANGRFQ9HD47 186 aaPredicted RBP8.07□□□□□ -1.12
VCAN-208ENST00000512590 CTSFQ9UBX1 484 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 RHBDL1O75783 438 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 DHRS3O75911 302 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 SP1P08047 785 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 OR13C7P0DN81 318 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 SULT1A1P50225 295 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 RPL27P61353 136 aaKnown RBP8.07□□□□□ -1.12
VCAN-208ENST00000512590 HYAL1Q12794 435 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 SLC16A13Q7RTY0 426 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 OR13C6PQ8NH95 151 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 LHFPL5Q8TAF8 219 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 PCED1AQ9H1Q7 454 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 UCK1Q9HA47 277 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 ORM2P19652 201 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 CD33P20138 364 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 ERVFRD-1P60508 538 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 JAG1P78504 1218 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 FAM3AP98173 230 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 SRSF5Q13243 272 aaKnown RBP8.07□□□□□ -1.12
VCAN-208ENST00000512590 SHBQ15464 509 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 TMEM52BQ4KMG9 183 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 PRSS35Q8N3Z0 413 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 OR6K3Q8NGY3 331 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 SLCO5A1Q9H2Y9 848 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 EBF2Q9HAK2 575 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 CA10Q9NS85 328 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 CCL26Q9Y258 94 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 GABRPO00591 440 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 FGF7P21781 194 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 GALR1P47211 349 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 CAPZBP47756 277 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 NHLH1Q02575 133 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 NHLH2Q02577 135 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 CEACAM16Q2WEN9 425 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 XKR7Q5GH72 579 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 RPL22L1Q6P5R6 122 aaKnown RBP8.07□□□□□ -1.12
VCAN-208ENST00000512590 SHISA5Q8N114 240 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 SEH1LQ96EE3 360 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 HARBI1Q96MB7 349 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 PHOX2BQ99453 314 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 PGAP2Q9UHJ9 254 aa8.07□□□□□ -1.12
VCAN-208ENST00000512590 A0A0B4J2A0 478 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 H0YIG0 161 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 LANCL1O43813 399 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 MT-ND4LP03901 98 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 KCNJ3P48549 501 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 CSNK1DP48730 415 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 ZXDAP98168 799 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 BEX5Q5H9J7 111 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 B3GNT9Q6UX72 402 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 CALHM1Q8IU99 346 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 NKAIN3Q8N8D7 197 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 LILRB4Q8NHJ6 448 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 GMPPAQ96IJ6 420 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms