RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ERVK-25P63136 954 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 BLOC1S1P78537 153 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 TNFRSF9Q07011 255 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 TMEM267Q0VDI3 215 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 PON2Q15165 354 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 NSDHLQ15738 373 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 STK11Q15831 433 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 VAMP3Q15836 100 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 ZNF718Q3SXZ3 478 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 TCTE1Q5JU00 501 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SOHLH1Q5JUK2 328 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 RAET1LQ5VY80 246 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 FAM205BPQ63HN1 556 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 NOXRED1Q6NXP6 359 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 PNCKQ6P2M8 343 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 ABHD17CQ6PCB6 329 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 IDO2Q6ZQW0 420 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 LINGO2Q7L985 606 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 OLIG3Q7RTU3 272 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 HSD17B13Q7Z5P4 300 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SLCO6A1Q86UG4 719 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SFTPA2Q8IWL1 248 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SLC30A8Q8IWU4 369 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 FAM185AQ8N0U4 392 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 ZNF540Q8NDQ6 660 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 BPIFCQ8NFQ6 507 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 OR5P2Q8WZ92 322 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 TMEM230Q96A57 120 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 MIB2Q96AX9 1013 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CNTNAP3BQ96NU0 1288 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 NMNAT3Q96T66 252 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 NEU1Q99519 415 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 KCTD14Q9BQ13 255 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SEC22CQ9BRL7 303 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 PSMG3Q9BT73 122 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SUCNR1Q9BXA5 334 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CNTNAP3Q9BZ76 1288 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SLC38A1Q9H2H9 487 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 TMEM38AQ9H6F2 299 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 TMEM231Q9H6L2 316 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 LIN7BQ9HAP6 207 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 RHOFQ9HBH0 211 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SH2D2AQ9NP31 389 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CHST11Q9NPF2 352 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 DMRT3Q9NQL9 472 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 ZNF331Q9NQX6 463 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 GAR1Q9NY12 217 aaKnown RBP1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 B3GAT1Q9P2W7 334 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 B4GALT6Q9UBX8 382 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CLEC2DQ9UHP7 191 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 ZNF346Q9UL40 294 aaKnown RBP1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 BOKQ9UMX3 212 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 AMDHD2Q9Y303 409 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 PRKAB1Q9Y478 270 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 RAI2Q9Y5P3 530 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 NSG1A0A0A6YYJ2 146 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 DAPL1A0PJW8 107 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 OR6C70A6NIJ9 312 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 FAM170BA6NMN3 283 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 ANKRD66B4E2M5 251 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 PRSS44E7EML9 344 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SLC16A4O15374 487 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SLC31A1O15431 190 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CSO75390 466 aaKnown RBP1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 UPK3AO75631 287 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 OR2F2O95006 317 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CBX7O95931 251 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 ACTL6AO96019 429 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 HPRP00739 348 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CSTAP01040 98 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 HBE1P02100 147 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 TK1P04183 234 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 OR8U8P0C7N1 319 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CXCL8P10145 99 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 RRASP10301 218 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 FCGR2AP12318 317 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 HOXB1P14653 301 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SDC1P18827 310 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 PGCP20142 388 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CTSSP25774 331 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 PCGF2P35227 344 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 G6PCP35575 357 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CHRNA7P36544 502 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CEACAM3P40198 252 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 NSG1P42857 185 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 CDX1P47902 265 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 POU3F4P49335 361 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 ACTBP60709 375 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 UBE2G1P62253 170 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 ACTG1P63261 375 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 HBG1P69891 147 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 HBG2P69892 147 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 SRPXP78539 464 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 KEAP1Q14145 624 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 LTB4RQ15722 352 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 ZIC1Q15915 447 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 TMEM183BQ1AE95 376 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 C14orf28Q4W4Y0 310 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 ANKRD39Q53RE8 183 aa1.47□□□□□ -2.17
TRAPPC13-211ENST00000512009 PYDC2Q56P42 97 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms