RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 UBE2V1Q13404 147 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ATP6V1FQ16864 119 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 RNF212Q495C1 297 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 HSD17B12Q53GQ0 312 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF542PQ5EBM4 170 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ENPP6Q6UWR7 440 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLCO4C1Q6ZQN7 724 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZDHHC13Q8IUH4 622 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 APRG1Q8IVJ8 170 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 SKA3Q8IX90 412 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 JAGN1Q8N5M9 183 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ARRDC2Q8TBH0 407 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 FAM45AQ8TCE6 357 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 CCDC107Q8WV48 283 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 WDYHV1Q96HA8 205 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC45A3Q96JT2 553 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 EPYCQ99645 322 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ARHGDIGQ99819 225 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ARL6Q9H0F7 186 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 MIXL1Q9H2W2 232 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ESRP2Q9H6T0 727 aaKnown RBP4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 NMRAL1Q9HBL8 299 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 WFDC1Q9HC57 220 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC52A3Q9NQ40 469 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 GPR160Q9UJ42 338 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 VPREB3Q9UKI3 123 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 FBXO5Q9UKT4 447 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 CKAP5Q14008 2032 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 EML5Q05BV3 1969 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 KIR2DL5BA0A0G2JN68 375 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 KIR2DL5BA0A0G2JPC4 375 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 B4DGG1 531 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 E5RGE8 158 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 PLPP1O14494 284 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 CYB5BO43169 146 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 FGF16O43320 207 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 GFRA3O60609 400 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 SEMA7AO75326 666 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 SOX30O94993 753 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 HPP00738 406 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 IGF2P01344 180 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 CD74P04233 296 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 APRTP07741 180 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 FAM87AP0C7U9 286 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF35P13682 527 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF30P17039 623 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 ENGP17813 658 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 CR2P20023 1033 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 GCAP28676 217 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 CD200P41217 278 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 SMCPP49901 116 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 UGT2B15P54855 530 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 ABCE1P61221 599 aaKnown RBP4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 PAX2Q02962 417 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 C2orf68Q2NKX9 166 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 RNASE10Q5GAN6 216 aaKnown RBP4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 ACTL10Q5JWF8 245 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 HIST2H2AA3Q6FI13 130 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 PWWP2BQ6NUJ5 590 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF585AQ6P3V2 769 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 Q6ZSR3 168 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 Q6ZSR9 355 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 RFLNAQ6ZTI6 216 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 OLIG3Q7RTU3 272 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 KIR2DL5AQ8N109 375 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 BCL6BQ8N143 479 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 ARRDC1Q8N5I2 433 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 PRELID2Q8N945 189 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 SUMF1Q8NBK3 374 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR1M1Q8NGA1 313 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR6M1Q8NGM8 313 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR2Y1Q8NGV0 311 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 KIR2DL5BQ8NHK3 375 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 GPR22Q99680 433 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 HCAR1Q9BXC0 346 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 FAM234AQ9H0X4 552 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 SEMA6AQ9H2E6 1030 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLCO1B3Q9NPD5 702 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 B3GAT2Q9NPZ5 323 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 IL36GQ9NZH8 169 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 NSG2Q9Y328 171 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 THADAQ6YHU6 1953 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 SPAG17Q6Q759 2223 aa4.42□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC22A20A6NK97 555 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 CCL22O00626 93 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 UPK1BO75841 260 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC22A5O76082 557 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 S1PR2O95136 353 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 BCHEP06276 602 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 HIST1H2AGP0C0S8 130 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 HIST1H1EP10412 219 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 RAB6AP20340 208 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SRD5A2P31213 254 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 GSK3BP49841 420 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 BTN3A2P78410 334 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 RGS1Q08116 209 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF415Q09FC8 603 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 SIX1Q15475 284 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZSWIM7Q19AV6 140 aa4.41□□□□□ -1.7
TRAPPC11-208ENST00000511955 GPR33Q49SQ1 333 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms