RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 UBE2E1P51965 193 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 RAP1BP61224 184 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 RAP1AP62834 184 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 MS4A2Q01362 244 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 TOP3AQ13472 1001 aaPredicted RBP9.45□□□□□ -0.9
RNF4-216ENST00000511859 DCTN2Q13561 401 aaKnown RBP9.45□□□□□ -0.9
RNF4-216ENST00000511859 ZSCAN26Q16670 478 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 KLHL22Q53GT1 634 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 CYBRD1Q53TN4 286 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 TSPYL5Q86VY4 417 aaPredicted RBP9.45□□□□□ -0.9
RNF4-216ENST00000511859 RBM45Q8IUH3 476 aaKnown RBP9.45□□□□□ -0.9
RNF4-216ENST00000511859 GPR32P1Q8NGA4 272 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 OR4D11Q8NGI4 311 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 PFN4Q8NHR9 129 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 ST8SIA4Q92187 359 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 NPFFR1Q9GZQ6 430 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 SLC22A4Q9H015 551 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 SIRT7Q9NRC8 400 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 ONECUT1Q9UBC0 465 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 HIF3AQ9Y2N7 669 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 NOP16Q9Y3C1 178 aaKnown RBP9.45□□□□□ -0.9
RNF4-216ENST00000511859 LYSTQ99698 3801 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 SACSQ9NZJ4 4579 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 STAB2Q8WWQ8 2551 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 HTR3EA5X5Y0 456 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 FCN3O75636 299 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 DUS4LO95620 317 aaKnown RBP9.44□□□□□ -0.9
RNF4-216ENST00000511859 PTBP3O95758 552 aaKnown RBP9.44□□□□□ -0.9
RNF4-216ENST00000511859 GYPAP02724 150 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 ZNF26P17031 533 aaPredicted RBP9.44□□□□□ -0.9
RNF4-216ENST00000511859 ATP6V1B2P21281 511 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 SAA4P35542 130 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 CTXN1P60606 82 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 LSM6P62312 80 aaKnown RBP9.44□□□□□ -0.9
RNF4-216ENST00000511859 AANATQ16613 207 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 ZBTB37Q5TC79 503 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 PRAMEF6Q5VXH4 476 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 CRIP3Q6Q6R5 217 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 CCDC80Q76M96 950 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 VTCN1Q7Z7D3 282 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 ARHGAP24Q8N264 748 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 BOLLQ8N9W6 283 aaKnown RBP9.44□□□□□ -0.9
RNF4-216ENST00000511859 SLC7A13Q8TCU3 470 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 CITED2Q99967 270 aaPredicted RBP9.44□□□□□ -0.9
RNF4-216ENST00000511859 MEGF9Q9H1U4 602 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 C20orf141Q9NUB4 165 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 SNX13Q9Y5W8 968 aa9.44□□□□□ -0.9
RNF4-216ENST00000511859 ADARB2-AS1A8MUL3 147 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 ANKRD65E5RJM6 399 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 AHCYL1O43865 530 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 DBHP09172 617 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 OR1E2P47887 323 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 SLC35A2P78381 396 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 TRIM25Q14258 630 aaKnown RBP9.43□□□□□ -0.9
RNF4-216ENST00000511859 LY6EQ16553 131 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 CCDC92Q53HC0 331 aaPredicted RBP9.43□□□□□ -0.9
RNF4-216ENST00000511859 NCR3LG1Q68D85 454 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 PGM2L1Q6PCE3 622 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 ASRGL1Q7L266 308 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 NKAIN4Q8IVV8 208 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 FAM86B1Q8N7N1 296 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 OR51G2Q8NGK0 314 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 TMEM239Q8WW34 195 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 TNFRSF14Q92956 283 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 RCC1LQ96I51 464 aaKnown RBP9.43□□□□□ -0.9
RNF4-216ENST00000511859 NSMCE2Q96MF7 247 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 MAGEL2Q9UJ55 1249 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 SH3GLB1Q9Y371 365 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 MED31Q9Y3C7 131 aa9.43□□□□□ -0.9
RNF4-216ENST00000511859 DNAH1Q9P2D7 4330 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 A0A1W2PRD5 423 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 A0A1W2PRF3 423 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 A0A1W2PRM7 423 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 GMDSO60547 372 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 LHBP01229 141 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 IFNA14P01570 189 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 KRTAP10-11P60412 298 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 HOXA4Q00056 320 aaPredicted RBP9.42□□□□□ -0.9
RNF4-216ENST00000511859 EGFEM1PQ0D2K5 195 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 OR8G1Q15617 311 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 LRRC75BQ2VPJ9 315 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 SPATS1Q496A3 300 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 TEX36Q5VZQ5 186 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 COLCA1Q6ZS62 124 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 FKBP9P1Q75LS8 142 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 DHFR2Q86XF0 187 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 FAM90A1Q86YD7 464 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 Q8N7P7 452 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 WIPF2Q8TF74 440 aaPredicted RBP9.42□□□□□ -0.9
RNF4-216ENST00000511859 TMEM255BQ8WV15 326 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 RASSF5Q8WWW0 418 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 UTP4Q969X6 686 aaKnown RBP9.42□□□□□ -0.9
RNF4-216ENST00000511859 HSH2DQ96JZ2 352 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 POLR2J2Q9GZM3 115 aaKnown RBP9.42□□□□□ -0.9
RNF4-216ENST00000511859 POLR2J3Q9H1A7 115 aaKnown RBP9.42□□□□□ -0.9
RNF4-216ENST00000511859 WDR76Q9H967 626 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 SERTAD4Q9NUC0 356 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 ACTR3BQ9P1U1 418 aa9.42□□□□□ -0.9
RNF4-216ENST00000511859 AURKCQ9UQB9 309 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms