RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 IRGMA1A4Y4 181 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 EFCAB10A6NFE3 127 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 SULT1C4O75897 302 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 IGHV3-13P01766 116 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 LIMS3P0CW19 117 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 LIMS4P0CW20 117 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 BMP4P12644 408 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 DCTDP32321 178 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 ALDH3B1P43353 468 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 PPOXP50336 477 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 ETV1P50549 477 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 OR12D2P58182 307 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 ZNF92Q03936 586 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 ST3GAL4Q11206 333 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 MALLQ13021 153 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 PSG7Q13046 419 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 GALEQ14376 348 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 GK2Q14410 553 aaPredicted RBP13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 GFOD2Q3B7J2 385 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 ZNF829Q3KNS6 432 aaPredicted RBP13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 LIPNQ5VXI9 398 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 FBXW12Q6X9E4 464 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 FAM220AQ7Z4H9 259 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 FAM168AQ92567 244 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 SGCDQ92629 289 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 GTF3AQ92664 365 aaKnown RBP13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 PPP1R14AQ96A00 147 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 C4orf36Q96KX1 117 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 NSD1Q96L73 2696 aaPredicted RBP13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 TPK1Q9H3S4 243 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 Q9H521 79 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 ISG20L2Q9H9L3 353 aaKnown RBP13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 INPP5EQ9NRR6 644 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 FKBP14Q9NWM8 211 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 PAK1IP1Q9NWT1 392 aaPredicted RBP13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 UBAP1Q9NZ09 502 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 CNOT2Q9NZN8 540 aaKnown RBP13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 TAAR3PQ9P1P4 343 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 DIMT1Q9UNQ2 313 aaKnown RBP13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 R4GMQ9 66 aa13.26□□□□□ -0.29
SH3TC1-220ENST00000511002 LOC110117498-PIK3R3F6TDL0 507 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 DENRO43583 198 aaKnown RBP13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 TUBG1P23258 451 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 DCKP27707 260 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 PSMB10P40306 273 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 EVX1P49640 407 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 OR2T2Q6IF00 324 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 MRPL21Q7Z2W9 205 aaKnown RBP13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 ZNF540Q8NDQ6 660 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 OR52H1Q8NGJ2 320 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 RORBQ92753 470 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 RNF166Q96A37 237 aaPredicted RBP13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 SGK3Q96BR1 496 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 TMEM80Q96HE8 168 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 SIGLEC11Q96RL6 698 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 PBOV1Q9GZY1 135 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 OR10A2Q9H208 303 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 DYNLRB1Q9NP97 96 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 G6PC2Q9NQR9 355 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 TUBG2Q9NRH3 451 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 PURGQ9UJV8 347 aaKnown RBP13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 GTF2A1LQ9UNN4 478 aa13.25□□□□□ -0.29
SH3TC1-220ENST00000511002 VWC2LB2RUY7 222 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 J3QLW9 94 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 M0R233 179 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 XRCC2O43543 280 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 TIMM8AO60220 97 aaPredicted RBP13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 RAC2P15153 192 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 ZNF19P17023 458 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 KITLGP21583 273 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 MMP16P51512 607 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 SELENOVP59797 346 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 ACTA2P62736 377 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 ACTG2P63267 376 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 CARTPTQ16568 116 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 TIGD6Q17RP2 521 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 NKPD1Q17RQ9 610 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 BCL2L15Q5TBC7 163 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 OR5AS1Q8N127 324 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 ZNF786Q8N393 782 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 SPSB4Q96A44 273 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 HAVCR1Q96D42 359 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 PELI1Q96FA3 418 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 REEP6Q96HR9 211 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 SP140LQ9H930 580 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 NUFIP1Q9UHK0 495 aaKnown RBP13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 CLEC2DQ9UHP7 191 aa13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 EXOSC1Q9Y3B2 195 aaKnown RBP13.24□□□□□ -0.29
SH3TC1-220ENST00000511002 ZSCAN5BA6NJL1 495 aa13.23□□□□□ -0.29
SH3TC1-220ENST00000511002 ACOD1A6NK06 481 aa13.23□□□□□ -0.29
SH3TC1-220ENST00000511002 PTGES3LE9PB15 166 aa13.23□□□□□ -0.29
SH3TC1-220ENST00000511002 LYNX1G3V0Z9 82 aa13.23□□□□□ -0.29
SH3TC1-220ENST00000511002 LILRA1O75019 489 aa13.23□□□□□ -0.29
SH3TC1-220ENST00000511002 TTRP02766 147 aa13.23□□□□□ -0.29
SH3TC1-220ENST00000511002 CCDC159P0C7I6 412 aa13.23□□□□□ -0.29
SH3TC1-220ENST00000511002 LYNX1P0DP58 116 aa13.23□□□□□ -0.29
SH3TC1-220ENST00000511002 NAT2P11245 290 aa13.23□□□□□ -0.29
SH3TC1-220ENST00000511002 MYL12AP19105 171 aa13.23□□□□□ -0.29
SH3TC1-220ENST00000511002 C21orf33P30042 268 aaPredicted RBP13.23□□□□□ -0.29
SH3TC1-220ENST00000511002 PDLIM4P50479 330 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms