RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 MXRA5Q9NR99 2828 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 hCG_38984A0A1B0GV85 526 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 GGT3PA6NGU5 568 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 CLDN25C9JDP6 229 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 DLGAP1O14490 977 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 LMX1BO60663 402 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 SRSF10O75494 262 aaKnown RBP11.42□□□□□ -0.58
SNF8-206ENST00000509989 BAG2O95816 211 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 PNPP00491 289 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 IGHV2-70P01814 119 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 ACKR3P25106 362 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 ALDH3A2P51648 485 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 MALLQ13021 153 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 ZMYND11Q15326 602 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 DMRTC1Q5HYR2 192 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 KRT77Q7Z794 578 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 SLC35F2Q8IXU6 374 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 PQLC1Q8N2U9 271 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 OR51G2Q8NGK0 314 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 OR13G1Q8NGZ3 307 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 SPRYD4Q8WW59 207 aaPredicted RBP11.42□□□□□ -0.58
SNF8-206ENST00000509989 REEP6Q96HR9 211 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 RAB3IPQ96QF0 476 aaPredicted RBP11.42□□□□□ -0.58
SNF8-206ENST00000509989 DIRC2Q96SL1 478 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 YIPF3Q9GZM5 350 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 EGLN1Q9GZT9 426 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 UFSP2Q9NUQ7 469 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 FAM206AQ9NX38 181 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 LAMP5Q9UJQ1 280 aa11.42□□□□□ -0.58
SNF8-206ENST00000509989 IGHV2-5P01817 119 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 SBK2P0C263 348 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 SLC15A1P46059 708 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 RAD23AP54725 363 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 CXCR4P61073 352 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 ELF3P78545 371 aaPredicted RBP11.41□□□□□ -0.58
SNF8-206ENST00000509989 ZMAT1Q5H9K5 638 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 LPCAT4Q643R3 524 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 ZNF826PQ6ZT77 177 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 ZNF454Q8N9F8 522 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 FAM81AQ8TBF8 368 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 PGAM5Q96HS1 289 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 HRASLS5Q96KN8 279 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 OR8B4Q96RC9 309 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 CNN2Q99439 309 aaKnown RBP11.41□□□□□ -0.58
SNF8-206ENST00000509989 ZNF665Q9H7R5 613 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 UBAP1Q9NZ09 502 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 MRM2Q9UI43 246 aaKnown RBP11.41□□□□□ -0.58
SNF8-206ENST00000509989 PPP1R3CQ9UQK1 317 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 RHBDD3Q9Y3P4 386 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 NPTNQ9Y639 398 aa11.41□□□□□ -0.58
SNF8-206ENST00000509989 ISPDA4D126 451 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 TMEM178BH3BS89 294 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 ENTPD6O75354 484 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 AVPP01185 164 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 ZFP36P26651 326 aaKnown RBP11.4□□□□□ -0.58
SNF8-206ENST00000509989 GSK3AP49840 483 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 PSMA6P60900 246 aaKnown RBP11.4□□□□□ -0.58
SNF8-206ENST00000509989 SRSF2Q01130 221 aaKnown RBP11.4□□□□□ -0.58
SNF8-206ENST00000509989 TIGD6Q17RP2 521 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 CR1LQ2VPA4 569 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 LCN1P1Q5VSP4 162 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 FAM166AQ6J272 317 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.4□□□□□ -0.58
SNF8-206ENST00000509989 LINC01356Q8N9X3 169 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 HPS1Q92902 700 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 RNF166Q96A37 237 aaPredicted RBP11.4□□□□□ -0.58
SNF8-206ENST00000509989 ADAT1Q9BUB4 502 aaKnown RBP11.4□□□□□ -0.58
SNF8-206ENST00000509989 TEX12Q9BXU0 123 aa11.4□□□□□ -0.58
SNF8-206ENST00000509989 METTL17Q9H7H0 456 aaPredicted RBP11.4□□□□□ -0.58
SNF8-206ENST00000509989 H3BSH0 61 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 XRCC2O43543 280 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 PLPP2O43688 288 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 FAM20BO75063 409 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 GABRB1P18505 474 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 TNFRSF1AP19438 455 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 TNFSF4P23510 183 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 CD200P41217 278 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 ROM1Q03395 351 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 ZNF85Q03923 595 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 OR8G1Q15617 311 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 LRRC36Q1X8D7 754 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 FAM120AOSQ5T036 256 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 ZNF322Q6U7Q0 402 aaPredicted RBP11.39□□□□□ -0.59
SNF8-206ENST00000509989 LYPD2Q6UXB3 125 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 C1orf229Q6ZS94 237 aaPredicted RBP11.39□□□□□ -0.59
SNF8-206ENST00000509989 RHOUQ7L0Q8 258 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 C11orf53Q8IXP5 236 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 OR8J1Q8NGP2 316 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 RAB1CQ92928 201 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 H2AFY2Q9P0M6 372 aaPredicted RBP11.39□□□□□ -0.59
SNF8-206ENST00000509989 IKZF2Q9UKS7 526 aa11.39□□□□□ -0.59
SNF8-206ENST00000509989 TMEM269A0A1B0GVZ9 245 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 A0A1W2PQL4 384 aaPredicted RBP11.38□□□□□ -0.59
SNF8-206ENST00000509989 SLC22A31A6NKX4 558 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 FCN3O75636 299 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 CLIC3O95833 236 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 TTRP02766 147 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 GRPP07492 148 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 ANPEPP15144 967 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 EGR1P18146 543 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms