RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 DNAJC4Q9NNZ3 241 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 GSN-AS1Q9NRJ2 163 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 KIAA1456Q9P272 454 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 UTS2RQ9UKP6 389 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 SLC27A5Q9Y2P5 690 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 CARHSP1Q9Y2V2 147 aaKnown RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 OR2W1Q9Y3N9 320 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 AFDNP55196 1824 aaKnown RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 TRAV34A0A0B4J273 112 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 IGSF23A1L1A6 192 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 TMEM189A5PLL7 270 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 NME4O00746 187 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 XRCC3O43542 346 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 MPIG6BO95866 241 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 CA1P00915 261 aaPredicted RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 VIPP01282 170 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 TRGC2P03986 189 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 NID1P14543 1247 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 HIST1H1DP16402 221 aaKnown RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 CD1CP29017 333 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 MC5RP33032 325 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 SLC37A1P57057 533 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 TGFBR3Q03167 851 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 IGFBP7Q16270 282 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 TCTN1Q2MV58 587 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 MIDNQ504T8 468 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 AWAT1Q58HT5 328 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 BEX5Q5H9J7 111 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 APOBEC3HQ6NTF7 200 aaKnown RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 METTL7BQ6UX53 244 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 ADGRA1Q86SQ6 560 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 OR4K14Q8NGD5 310 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 OR52P1PQ8NH57 321 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 MYOZ3Q8TDC0 251 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 ASB5Q8WWX0 329 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 RND1Q92730 232 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 PERPQ96FX8 193 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 VN1R3Q9BXE9 311 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 COMMD5Q9GZQ3 224 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 NAA60Q9H7X0 242 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 GDE1Q9NZC3 331 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 CACNG4Q9UBN1 327 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 FBXL17Q9UF56 701 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 URGCP-MRPS24S4R325 110 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 MEX3AA1L020 520 aaKnown RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 LRRC3CA6NJW4 275 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 ZBTB42B2RXF5 422 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 MCRIP1C9JLW8 97 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 ZNF253O75346 499 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 CD160O95971 181 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 MAS1P04201 325 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 MAS1LP35410 378 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 ZNF140P52738 457 aaPredicted RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 STC1P52823 247 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 DCAF7P61962 342 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 NUTF2P61970 127 aaKnown RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 RACK1P63244 317 aaKnown RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 RHOGP84095 191 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 PAX5Q02548 391 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 EVX2Q03828 476 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 NBPF12Q5TAG4 269 aaPredicted RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 TMEM268Q5VZI3 342 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 FDX2Q6P4F2 183 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 RNASEKQ6P5S7 137 aaKnown RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 PARS2Q7L3T8 475 aaKnown RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 FBXO16Q8IX29 292 aaPredicted RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 PNPLA1Q8N8W4 532 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 OR10S1Q8NGN2 331 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 GPR150Q8NGU9 434 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 OR51H1Q8NH63 302 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 RXFP4Q8TDU9 374 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 IGSF21Q96ID5 467 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 SENP8Q96LD8 212 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 JSRP1Q96MG2 331 aaPredicted RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 GINS3Q9BRX5 216 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 TINAGL1Q9GZM7 467 aaPredicted RBP3.26□□□□□ -1.89
USP53-205ENST00000509769 CNTD2Q9H8S5 307 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 SYNPO2LQ9H987 977 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 PRSS50Q9UI38 385 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 ADAMTS5Q9UNA0 930 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 LAMTOR2Q9Y2Q5 125 aa3.26□□□□□ -1.89
USP53-205ENST00000509769 NRCAMQ92823 1304 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 A0A1B0GWJ7 208 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 hCG_1809904A0A1W2PP81 198 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 A0A1W2PPE2 198 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 A0A1W2PR64 198 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ANTXRLA6NF34 631 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 FBLL1A6NHQ2 334 aaKnown RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 C1QTNF9BB2RNN3 333 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 SMPD2O60906 423 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 CLEC3AO75596 197 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 SCO1O75880 301 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 SORBS2O94875 1100 aaKnown RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 CRYAAP02489 173 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 AMHP03971 560 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ARG1P05089 322 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 SELEP16581 610 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ORM2P19652 201 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ZNF93P35789 620 aaPredicted RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 LHX2P50458 406 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms