RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SLC25A32Q9H2D1 315 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 MPIG6BO95866 241 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 RLN2P04090 185 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 CYC1P08574 325 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 NR2C1P13056 603 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 GUCA1AP43080 201 aaPredicted RBP15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 GRB2P62993 217 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 ZNF239Q16600 458 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 HIST3H3Q16695 136 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 LRRC37A5PQ49AS3 106 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 DOK3Q7L591 496 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 FADS6Q8N9I5 356 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 OR4K15Q8NH41 348 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 OR1S1Q8NH92 325 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 ELP5Q8TE02 316 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 ST8SIA2Q92186 375 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 ST8SIA4Q92187 359 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 MRGPRFQ96AM1 343 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 NICN1Q9BSH3 213 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 LPAR5Q9H1C0 372 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 TNFSF18Q9UNG2 199 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 PHF3Q92576 2039 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 LY6G6EA0A0G2JKS1 128 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 A8MXK9 166 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 FAM25EA8MYX2 175 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 GSTP1P09211 210 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 VAMP1P23763 118 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 FAM57BQ71RH2 274 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 HSD17B13Q7Z5P4 300 aaPredicted RBP15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 OR5AS1Q8N127 324 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 PPP1R1CQ8WVI7 109 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 RAB3CQ96E17 227 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 GPER1Q99527 375 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 COQ3Q9NZJ6 369 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 U3KQA8 63 aa15.86■□□□□ 0.13
CCHCR1-228ENST00000509552 LOC102725191A0A1B0GVB3 256 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 SSX5O60225 188 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 PMP2P02689 132 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 AKR1C4P17516 323 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 GFOD2Q3B7J2 385 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 PRAMEF20Q5VT98 475 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 MRPL14Q6P1L8 145 aaKnown RBP15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 OVCH2Q7RTZ1 564 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 PNRC2Q9NPJ4 139 aaKnown RBP15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 LOC105371267A0A1B0GV96 52 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 OR2AT4A6NND4 320 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 CDC14BO60729 498 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 RAMP1O60894 148 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 DKK1O94907 266 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 FGF2P09038 288 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 CCL1P22362 96 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 OR3A4PP47883 348 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 TAS2R31P59538 309 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 PTCRAQ6ISU1 281 aaPredicted RBP15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 GLRX5Q86SX6 157 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 SAP25Q8TEE9 199 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 CASTOR1Q8WTX7 329 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 VRK1Q99986 396 aaPredicted RBP15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 SOX7Q9BT81 388 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 TMEM59Q9BXS4 323 aa15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 CHCHD2Q9Y6H1 151 aaPredicted RBP15.85■□□□□ 0.13
CCHCR1-228ENST00000509552 EFSO43281 561 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 HPP00738 406 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 DLSTP36957 453 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 CLDN17P56750 224 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 ACTBL2Q562R1 376 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 TMPPEQ6ZT21 453 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 TMEM104Q8NE00 496 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 BVESQ8NE79 360 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 THAP6Q8TBB0 222 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 ZNF319Q9P2F9 582 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 SPEGQ15772 3267 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 A0A087WZY1 265 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 D6RAR5 112 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 BCL2L11O43521 198 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 DUS4LO95620 317 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 HIST1H1DP16402 221 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 STARP49675 285 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 ATP1B3P54709 279 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 SGCAQ16586 387 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 TUSC1Q2TAM9 212 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 JMJD6Q6NYC1 403 aaPredicted RBP15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 ACOT7LQ6ZUV0 252 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 KCTD9Q7L273 389 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 RNF144BQ7Z419 303 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 NAA40Q86UY6 237 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 ADAD2Q8NCV1 583 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 PXT1Q8NFP0 134 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 OR56B1Q8NGI3 324 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 URM1Q9BTM9 101 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 OCIAD1Q9NX40 245 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 NXT1Q9UKK6 140 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 CACNA1EQ15878 2313 aa15.84■□□□□ 0.13
CCHCR1-228ENST00000509552 A0A0A6YYD4 124 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 SOCS1O15524 211 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 CRTAPO75718 401 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 AVPR2P30518 371 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 HOGA1Q86XE5 327 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 EIF4E3Q8N5X7 224 aaKnown RBP15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 PNLDC1Q8NA58 520 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms