RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 GALNT16Q8N428 558 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 SPICQ8N5J4 248 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 ZFP62Q8NB50 900 aaPredicted RBP8.12□□□□□ -1.11
HTT-205ENST00000509043 TMEM178AQ8NBL3 297 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 OR52N4Q8NGI2 321 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 OR4C16Q8NGL9 310 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 OR1F12Q8NHA8 337 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 GRPEL2Q8TAA5 225 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 SSC4DQ8WTU2 575 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 CCDC107Q8WV48 283 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 CAPSLQ8WWF8 208 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 AQP3Q92482 292 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 HAS2Q92819 552 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 SPSB1Q96BD6 273 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 SEH1LQ96EE3 360 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 POM121Q96HA1 1249 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 RADILQ96JH8 1075 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 SIGLEC12Q96PQ1 595 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 FYTTD1Q96QD9 318 aaKnown RBP8.12□□□□□ -1.11
HTT-205ENST00000509043 FOXB1Q99853 325 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 URM1Q9BTM9 101 aaKnown RBP8.12□□□□□ -1.11
HTT-205ENST00000509043 TTTY12Q9BZ98 90 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 CHST5Q9GZS9 411 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 CST11Q9H112 138 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 TP63Q9H3D4 680 aaPredicted RBP8.12□□□□□ -1.11
HTT-205ENST00000509043 EXO5Q9H790 373 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 CRLF2Q9HC73 371 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 GPR35Q9HC97 309 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 NPDC1Q9NQX5 325 aaPredicted RBP8.12□□□□□ -1.11
HTT-205ENST00000509043 SCP2D1Q9UJQ7 156 aa8.12□□□□□ -1.11
HTT-205ENST00000509043 MRPS28Q9Y2Q9 187 aaKnown RBP8.12□□□□□ -1.11
HTT-205ENST00000509043 SDK2Q58EX2 2172 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 UBE2QL1A1L167 161 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 PINLYPA6NC86 204 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 DISC1C4P0D8 188 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 F5H5K5 113 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 RAB27BO00194 218 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 LMX1BO60663 402 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 MRPL33O75394 65 aaKnown RBP8.11□□□□□ -1.11
HTT-205ENST00000509043 CA11O75493 328 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 KDM4BO94953 1096 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 ITGB2P05107 769 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 HCKP08631 526 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 VSIG8P0DPA2 414 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 COX5BP10606 129 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 LIPCP11150 499 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 C4BPBP20851 252 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 PRKACBP22694 351 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 SLC6A9P48067 706 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 CLDN18P56856 261 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 PLA2G7Q13093 441 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 FCN2Q15485 313 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 ZNF260Q3ZCT1 412 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 ACTBL2Q562R1 376 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 ZBTB37Q5TC79 503 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 ZNF626Q68DY1 528 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 AWAT2Q6E213 333 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 SFRP4Q6FHJ7 346 aaPredicted RBP8.11□□□□□ -1.11
HTT-205ENST00000509043 MTFR2Q6P444 385 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 SLC16A14Q7RTX9 510 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 ZNF584Q8IVC4 421 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 GABRG1Q8N1C3 465 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 ASCC1Q8N9N2 400 aaKnown RBP8.11□□□□□ -1.11
HTT-205ENST00000509043 STEAP2Q8NFT2 490 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 OR56B1Q8NGI3 324 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 OR10R2Q8NGX6 335 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 ROBO4Q8WZ75 1007 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 FBXO17Q96EF6 278 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 FAM71F1Q96KD3 344 aaPredicted RBP8.11□□□□□ -1.11
HTT-205ENST00000509043 DMRTB1Q96MA1 342 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 PRRT1Q99946 306 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 BCO1Q9HAY6 547 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.11□□□□□ -1.11
HTT-205ENST00000509043 SLC2A8Q9NY64 477 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 IL17BQ9UHF5 180 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 PLEKHA6Q9Y2H5 1048 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 NOSIPQ9Y314 301 aaKnown RBP8.11□□□□□ -1.11
HTT-205ENST00000509043 BDP1A6H8Y1 2624 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 KIF26BQ2KJY2 2108 aa8.11□□□□□ -1.11
HTT-205ENST00000509043 A8MV72 311 aaPredicted RBP8.1□□□□□ -1.11
HTT-205ENST00000509043 PRR33A8MZF0 331 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 ZNF736B4DX44 427 aaPredicted RBP8.1□□□□□ -1.11
HTT-205ENST00000509043 ARPC1BO15143 372 aaKnown RBP8.1□□□□□ -1.11
HTT-205ENST00000509043 XRCC2O43543 280 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 ZNF780AO75290 641 aaPredicted RBP8.1□□□□□ -1.11
HTT-205ENST00000509043 ATP6V1G1O75348 118 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 RAB3DO95716 219 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 FTH1P19P0C7X4 201 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 NAT2P11245 290 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 FCGR2AP12318 317 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 ABOP16442 354 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 STARP49675 285 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 VEGFCP49767 419 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 MEOX1P50221 254 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 NKX2-5P52952 324 aaPredicted RBP8.1□□□□□ -1.11
HTT-205ENST00000509043 UNC119Q13432 240 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 SLC10A1Q14973 349 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 CNN3Q15417 329 aaKnown RBP8.1□□□□□ -1.11
HTT-205ENST00000509043 ST3GAL2Q16842 350 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 RSPO1Q2MKA7 263 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms