RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 FAM3DQ96BQ1 224 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 LOXL4Q96JB6 756 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 WWTR1Q9GZV5 400 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 LIME1Q9H400 295 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 FBXL15Q9H469 300 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ALG9Q9H6U8 611 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 RCC2Q9P258 522 aaKnown RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 EMCNQ9ULC0 261 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 LRRC42Q9Y546 428 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 NSG1A0A0A6YYJ2 146 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 E9PAM4 449 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 POC1B-GALNT4F8VUJ3 575 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 MBTPS2O43462 519 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 OAS1P00973 400 aaKnown RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 RPL12P30050 165 aaKnown RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 TIA1P31483 386 aaKnown RBP eCLIP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 RFX2P48378 723 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 RPL31P62899 125 aaKnown RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 CSNK1G2P78368 415 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ABRAXAS2Q15018 415 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 OXA1LQ15070 435 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 RNF212Q495C1 297 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ARTNQ5T4W7 220 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 XKRXQ6PP77 449 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 MRGPREQ86SM8 312 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 LHFPL3Q86UP9 236 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 FAM89BQ8N5H3 189 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 CPSF7Q8N684 471 aaKnown RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 MZB1Q8WU39 189 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 OSTF1Q92882 214 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ANKRD9Q96BM1 317 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 MRPL48Q96GC5 212 aaKnown RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 TGS1Q96RS0 853 aaKnown RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 S1PR3Q99500 378 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SORT1Q99523 831 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 C12orf57Q99622 126 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 FOXC2Q99958 501 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 HOPXQ9BPY8 73 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 CLSTN3Q9BQT9 956 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 NXF2Q9GZY0 626 aaKnown RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SYT4Q9H2B2 425 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SLCO1B3Q9NPD5 702 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SLC7A11Q9UPY5 501 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 TESMINQ9Y4I5 508 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 C20orf202A1L168 122 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 B4DEV8 164 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 STK17BO94768 372 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 IFNA1P01562 189 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SHBGP04278 402 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SULT1A3P0DMM9 295 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SULT1A4P0DMN0 295 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 RORCP51449 518 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 GPX6P59796 221 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 GAGE13Q4V321 117 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 FAM90A2PQ658T7 463 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM52Q8NDY8 209 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 OR4F15Q8NGB8 312 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 FAM3CQ92520 227 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ARPC1AQ92747 370 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 AURKBQ96GD4 344 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM19Q96HH6 336 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 TBL1YQ9BQ87 522 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 RNF167Q9H6Y7 350 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 PILRAQ9UKJ1 303 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 TP53TG5Q9Y2B4 290 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 PLXNA2O75051 1894 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 C5orf67F2Z3F1 127 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 F8W735 103 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SIGLEC5O15389 551 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 CYB5BO43169 146 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 TSPAN2O60636 221 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SERPINA6P08185 405 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ADRA2AP08913 450 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 NELFEP18615 380 aaKnown RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 NDUFA6P56556 154 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SKP2Q13309 424 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 DNASE1L3Q13609 305 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ACOT6Q3I5F7 207 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM176BQ3YBM2 270 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SLC16A12Q6ZSM3 486 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 Q6ZSR6 202 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 MBOAT2Q6ZWT7 520 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 NUFIP2Q7Z417 695 aaKnown RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SCD5Q86SK9 330 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 PUSL1Q8N0Z8 303 aaKnown RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF383Q8NA42 475 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ITFG1Q8TB96 612 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 PIGCQ92535 297 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 UBE2E3Q969T4 207 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 FRG2BQ96QU4 278 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 OR8B4Q96RC9 309 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 POPDC3Q9HBV1 291 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 DDIT4Q9NX09 232 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF107Q9UII5 783 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 B9D1Q9UPM9 204 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 INSL6Q9Y581 213 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 CPQQ9Y646 472 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 H0YIG0 161 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 H3BP45 60 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 MGRN1O60291 552 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms