RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 MED25Q71SY5 747 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 H1FNTQ75WM6 255 aaPredicted RBP6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 PLPP6Q8IY26 295 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 SLC35G3Q8N808 338 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 OR4S1Q8NGB4 309 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 PIGTQ969N2 578 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 ISOC2Q96AB3 205 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 SLAMF6Q96DU3 332 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 FAM122AQ96E09 287 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 PIK3IP1Q96FE7 263 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 SIGLEC11Q96RL6 698 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 C1QTNF6Q9BXI9 259 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 CREBZFQ9NS37 354 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 SIRT3Q9NTG7 399 aaPredicted RBP6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 LIN7CQ9NUP9 197 aaKnown RBP6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 DNMT3BQ9UBC3 853 aaKnown RBP6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 APOBEC3BQ9UH17 382 aaKnown RBP6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 A0A1B0GUL6 1792 aa6.63□□□□□ -1.35
UBE2D3-224ENST00000508474 AQP7O14520 342 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 PRKRAO75569 313 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 EIF3GO75821 320 aaKnown RBP eCLIP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 HLA-DQB1P01920 261 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 FKBP2P26885 142 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 CD96P40200 585 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 ECH1Q13011 328 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 CCSMST1Q4G0I0 132 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 TEX30Q5JUR7 227 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 DMKNQ6E0U4 476 aaPredicted RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 H2BFWTQ7Z2G1 175 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 PUSL1Q8N0Z8 303 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 OR2T10Q8NGZ9 312 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 PELI1Q96FA3 418 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 OR10C1Q96KK4 312 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF552Q9H707 407 aaPredicted RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 SLCO1B1Q9Y6L6 691 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 C2orf72A6NCS6 295 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 FAM74A7A6NL05 159 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 FGF2P09038 288 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 CXCL2P19875 107 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 C17orf67Q0P5P2 114 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 FAM74A3Q4VXF1 159 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 NHLRC3Q5JS37 347 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 LHFPL2Q6ZUX7 228 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 RBMXL3Q8N7X1 1067 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 M1APQ8TC57 530 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 NUDT22Q9BRQ3 303 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 ANGPTL4Q9BY76 406 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 RIMS4Q9H426 269 aaPredicted RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 MRPS18AQ9NVS2 196 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 KLF15Q9UIH9 416 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF346Q9UL40 294 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 NRXN3Q9Y4C0 1643 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF816-ZNF321PA0A0X1KG74 233 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 TMEM272A0A1B0GTI8 110 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 P2RY1P47900 373 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 POLR2GP62487 172 aaKnown RBP eCLIP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF750Q32MQ0 723 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 CLLU1OSQ5K130 101 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 SPANXN5Q5MJ07 72 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 TMEM164Q5U3C3 297 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 UBE3DQ7Z6J8 389 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 ARL6IP6Q8N6S5 226 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF321PQ8N8H1 164 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 PBX4Q9BYU1 374 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 FBXO34Q9NWN3 711 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 METTL1Q9UBP6 276 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 SRPK3Q9UPE1 567 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 MMACHCQ9Y4U1 282 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 LAMB1P07942 1786 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 A0A1W2PR48 441 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 MAP1LC3B2A6NCE7 125 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 PPM1DO15297 605 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 OGG1O15527 345 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 TCF21O43680 179 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 EIF1BO60739 113 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 NXPH3O95157 252 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 HPP00738 406 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 PMCHP20382 165 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 PXNP49023 591 aaPredicted RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 CSNK1EP49674 416 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 PCBP3P57721 371 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 UBE2G2P60604 165 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 OR5I1Q13606 314 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 PABPC1L2AQ5JQF8 200 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 SLC25A42Q86VD7 318 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 OR51E1Q8TCB6 317 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 CCDC74AQ96AQ1 378 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 MS4A3Q96HJ5 214 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 OR8B4Q96RC9 309 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 MAP1LC3BQ9GZQ8 125 aa6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 GSX1Q9H4S2 264 aaPredicted RBP6.62□□□□□ -1.35
UBE2D3-224ENST00000508474 PRSS37A4D1T9 235 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 RRP8O43159 456 aaKnown RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 TMPRSS11DO60235 418 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 CIDEAO60543 219 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 GPANK1O95872 356 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 FBP1P09467 338 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 SEC11BP0C7V7 166 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 BSXQ3C1V8 233 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 STUMQ69YW2 141 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms