RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 GTPBP8Q8N3Z3 284 aaPredicted RBP12.79□□□□□ -0.36
DDX41-208ENST00000507955 STPG2Q8N412 459 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 ZNF283Q8N7M2 679 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 TMEM104Q8NE00 496 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 RHBDD1Q8TEB9 315 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 THRSPQ92748 146 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 RBM24Q9BX46 236 aaKnown RBP12.79□□□□□ -0.36
DDX41-208ENST00000507955 TMEM138Q9NPI0 162 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 ZNF230Q9UIE0 474 aaPredicted RBP12.79□□□□□ -0.36
DDX41-208ENST00000507955 DKKL1Q9UK85 242 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 NXT1Q9UKK6 140 aaKnown RBP12.79□□□□□ -0.36
DDX41-208ENST00000507955 STK17BO94768 372 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 TPPPO94811 219 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 DBHP09172 617 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 TCN2P20062 427 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 NTF4P34130 210 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 FOLR3P41439 243 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 EIF1P41567 113 aaKnown RBP12.79□□□□□ -0.36
DDX41-208ENST00000507955 STARP49675 285 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 H3F3AP84243 136 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 SORDQ00796 357 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 C4orf46Q504U0 113 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 C1orf100Q5SVJ3 147 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 ZNF660Q6AZW8 331 aaPredicted RBP12.79□□□□□ -0.36
DDX41-208ENST00000507955 SCARB1Q8WTV0 552 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 TNFAIP8L1Q8WVP5 186 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 ANGPTL4Q9BY76 406 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 SRXN1Q9BYN0 137 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 POFUT1Q9H488 388 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 BANF2Q9H503 90 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 HDGFL3Q9Y3E1 203 aa12.79□□□□□ -0.36
DDX41-208ENST00000507955 TRAV14DV4A0A0A6YYC5 116 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 LOC390937A0A1W2PQ73 354 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 PPP3CBP16298 524 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 OR3A4PP47883 348 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 SLC35A1P78382 337 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 TAGLNQ01995 201 aaKnown RBP12.78□□□□□ -0.36
DDX41-208ENST00000507955 BTN1A1Q13410 526 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 HIST3H3Q16695 136 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 LY6G6FQ5SQ64 297 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 AWAT2Q6E213 333 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 GSG1LQ6UXU4 331 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 OR1S1Q8NH92 325 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 MICU1Q9BPX6 476 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 TAS2R8Q9NYW2 309 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 MEGF11A6BM72 1044 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 TTLL8A6PVC2 850 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 ITGB2P05107 769 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 CD63P08962 238 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 CD37P11049 281 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 CALCRP30988 508 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 ZNF93P35789 620 aaPredicted RBP12.78□□□□□ -0.36
DDX41-208ENST00000507955 SLC6A9P48067 706 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 EXT1Q16394 746 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 CDNFQ49AH0 187 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 SLC51BQ86UW2 128 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 FJX1Q86VR8 437 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 ZNF101Q8IZC7 436 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 ZBTB44Q8NCP5 570 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 OR5D14Q8NGL3 314 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 PAQR8Q8TEZ7 354 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 ZBTB8AQ96BR9 441 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 SLC6A7Q99884 636 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 SELENOIQ9C0D9 397 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 ARRDC1-AS1Q9H2J1 176 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 DOCK10Q96BY6 2186 aa12.78□□□□□ -0.36
DDX41-208ENST00000507955 A8MXK9 166 aa12.77□□□□□ -0.36
DDX41-208ENST00000507955 ZNF20P17024 532 aa12.77□□□□□ -0.36
DDX41-208ENST00000507955 RAB3AP20336 220 aa12.77□□□□□ -0.36
DDX41-208ENST00000507955 ADH6P28332 368 aa12.77□□□□□ -0.36
DDX41-208ENST00000507955 RFC3P40938 356 aa12.77□□□□□ -0.36
DDX41-208ENST00000507955 MLF1P58340 268 aa12.77□□□□□ -0.36
DDX41-208ENST00000507955 PEAR1Q5VY43 1037 aaPredicted RBP12.77□□□□□ -0.36
DDX41-208ENST00000507955 SLC25A43Q8WUT9 341 aaPredicted RBP12.77□□□□□ -0.36
DDX41-208ENST00000507955 SLC17A5Q9NRA2 495 aa12.77□□□□□ -0.36
DDX41-208ENST00000507955 PCSK5Q92824 1860 aa12.77□□□□□ -0.36
DDX41-208ENST00000507955 TTC28Q96AY4 2481 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 TSPAN4O14817 238 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 SPDEFO95238 335 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 RLN2P04090 185 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 PATE4P0C8F1 98 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 NUP62P37198 522 aaPredicted RBP12.77□□□□□ -0.37
DDX41-208ENST00000507955 CSNK1A1P48729 337 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 DUSP3P51452 185 aaPredicted RBP12.77□□□□□ -0.37
DDX41-208ENST00000507955 QRFPP83859 136 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 SLC23A3Q6PIS1 610 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 PPP1R32Q7Z5V6 425 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 SHARPINQ9H0F6 387 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 PPA2Q9H2U2 334 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 MED9Q9NWA0 146 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 PISDQ9UG56 409 aa12.77□□□□□ -0.37
DDX41-208ENST00000507955 A0A0A6YYD4 124 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 ZNF736B4DX44 427 aaPredicted RBP12.76□□□□□ -0.37
DDX41-208ENST00000507955 NPIPA2E9PIF3 369 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 NPIPA3F8WFD2 350 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 YKT6O15498 198 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 ZNHIT1O43257 154 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 CYB5AP00167 134 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 MPGP29372 298 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 DSCR4P56555 118 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms