RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 C1orf123Q9NWV4 160 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 MRPL15Q9P015 296 aaKnown RBP9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 N6AMT1Q9Y5N5 214 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 LYVE1Q9Y5Y7 322 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 TRAV38-1A0A0B4J264 116 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 hCG_1807616A0A1W2PRN6 198 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 FAM181BA6NEQ2 426 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 OOEPA6NGQ2 149 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 ZNF879B4DU55 563 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 TNFRSF11BO00300 401 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 P2RY10O00398 339 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 TOX4O94842 621 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 GYPAP02724 150 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 GYPBP06028 91 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 GRPP07492 148 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 MMP9P14780 707 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 ENTPD1P49961 510 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 BPIFB3P59826 476 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 CRMP1Q14194 572 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 TAF13Q15543 124 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 ZNF362Q5T0B9 420 aaPredicted RBP9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 FIP1L1Q6UN15 594 aaKnown RBP9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 Q6YL49 198 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 ZNF511Q8NB15 262 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 PLPP7Q8NBV4 271 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 OR4Q3Q8NH05 313 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 SLAMF6Q96DU3 332 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 KCNJ15Q99712 375 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 RASSF4Q9H2L5 321 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 NOX4Q9NPH5 578 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 TRIM36Q9NQ86 728 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 CENPMQ9NSP4 180 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 ARL8BQ9NVJ2 186 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 IL20Q9NYY1 176 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 KIF17Q9P2E2 1029 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 TAGLN3Q9UI15 199 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 MMP24Q9Y5R2 645 aa9.57□□□□□ -0.88
HMGCS1-204ENST00000507293 IGHV3OR15-7A0A075B7D8 119 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 CENPVL3A0A0U1RRI6 287 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 ZNF878C9JN71 531 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 ZNF593O00488 134 aaPredicted RBP9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 TNFRSF13BO14836 293 aaPredicted RBP9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 TBX1O43435 398 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 XRCC2O43543 280 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 FCN3O75636 299 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 KRT36O76013 467 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 CCNB2O95067 398 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 KNG1P01042 644 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 CRYBA1P05813 215 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 LIPFP07098 398 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 MELTFP08582 738 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 CLUP10909 449 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 ATP6V1B2P21281 511 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 FMO3P31513 532 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 HMGA2P52926 109 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 RAG2P55895 527 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 MXRA7P84157 204 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 PCK2Q16822 640 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 METTL11BQ5VVY1 283 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 ZNF770Q6IQ21 691 aaPredicted RBP9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 C16orf89Q6UX73 402 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 CYP2R1Q6VVX0 501 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 RASSF6Q6ZTQ3 369 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 CPLX4Q7Z7G2 160 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 FAM90A1Q86YD7 464 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 DEFB107AQ8IZN7 70 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 LINC00471Q8N535 108 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 GCSAMQ8N6F7 178 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 PNLDC1Q8NA58 520 aaKnown RBP9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 SPERTQ8NA61 448 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 AQP11Q8NBQ7 271 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 OR4F5Q8NH21 305 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 WFDC12Q8WWY7 111 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 WDFY2Q96P53 400 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 TSSK6Q9BXA6 273 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 CHIAQ9BZP6 476 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 TRIM15Q9C019 465 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 SIRPDQ9H106 197 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 OPA3Q9H6K4 179 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 ARMC1Q9NVT9 282 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 C14orf119Q9NWQ9 140 aa9.56□□□□□ -0.88
HMGCS1-204ENST00000507293 IGHV1-69DA0A0B4J2H0 117 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 DHRS12A0PJE2 317 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 ANKRD30BLA7E2S9 258 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 DVL1O14640 695 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 NDUFA2O43678 99 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 SOX14O95416 240 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 GASTP01350 101 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 IGHV1-69P01742 117 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 ANXA2P07355 339 aaKnown RBP9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 SPI1P17947 270 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 CX3CR1P49238 355 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 SLC25A1P53007 311 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 RELBQ01201 579 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 SRSF4Q08170 494 aaKnown RBP9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 MZT1Q08AG7 82 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 POU4F2Q12837 409 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 PPP1R8Q12972 351 aaKnown RBP9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 BTN2A1Q7KYR7 527 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms