RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 TNK1Q13470 666 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 TIGD6Q17RP2 521 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 OR2G6Q5TZ20 316 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 OR2T2Q6IF00 324 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 PGAP1Q75T13 922 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 CDH24Q86UP0 819 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 ZNF786Q8N393 782 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 PRSS35Q8N3Z0 413 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 KLHL36Q8N4N3 616 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 OR52N1Q8NH53 320 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 HAVCR2Q8TDQ0 301 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 SPRYD4Q8WW59 207 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-210ENST00000506767 REEP6Q96HR9 211 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 CACNG6Q9BXT2 260 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 YTHDF1Q9BYJ9 559 aaKnown RBP10.97□□□□□ -0.65
TCOF1-210ENST00000506767 CXorf56Q9H5V9 222 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 BEX4Q9NWD9 120 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-210ENST00000506767 FRRS1LQ9P0K9 344 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 ERVK-18Q9QC07 812 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 CGGBP1Q9UFW8 167 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-210ENST00000506767 GPR160Q9UJ42 338 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 SLC22A13Q9Y226 551 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 PMF1-BGLAPU3KQ54 211 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 ARFGEF3Q5TH69 2177 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 LRBAP50851 2863 aa10.97□□□□□ -0.65
TCOF1-210ENST00000506767 A0A1B0GWJ7 208 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 A0A1W2PPW3 197 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 E9PI62 339 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 M0R233 179 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 MT-ND5P03915 603 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 CFL1P23528 166 aaKnown RBP10.96□□□□□ -0.65
TCOF1-210ENST00000506767 LIPAP38571 399 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 ALDH3B1P43353 468 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 KIR3DL2P43630 455 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 TGM4P49221 684 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 PRSS12P56730 875 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 NANOS3P60323 173 aaKnown RBP10.96□□□□□ -0.65
TCOF1-210ENST00000506767 IRF3Q14653 427 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 OR8B8Q15620 311 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 DEFB113Q30KQ7 82 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 WDR38Q5JTN6 314 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 BCL2L15Q5TBC7 163 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 TMPRSS11AQ6ZMR5 421 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 Q6ZR03 302 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 Q6ZSR3 168 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 KRT74Q7RTS7 529 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 MRPL21Q7Z2W9 205 aaKnown RBP10.96□□□□□ -0.65
TCOF1-210ENST00000506767 NANOGP1Q8N7R0 232 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 PLPP7Q8NBV4 271 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 OR8G5Q8NG78 346 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 OR2G2Q8NGZ5 317 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 ITFG2Q969R8 447 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 SOX7Q9BT81 388 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 MS4A5Q9H3V2 200 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 CYSLTR2Q9NS75 346 aa10.96□□□□□ -0.65
TCOF1-210ENST00000506767 CHCHD3Q9NX63 227 aaKnown RBP10.96□□□□□ -0.65
TCOF1-210ENST00000506767 A0A1B0GTI1 187 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 CD300LBA8K4G0 201 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 C17orf100A8MU93 164 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 RGS10O43665 173 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 TIMM8AO60220 97 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-210ENST00000506767 LILRA1O75019 489 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 ADH4P08319 380 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 HTR1AP08908 422 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 NAT2P11245 290 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 CCL1P22362 96 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 DDOSTP39656 456 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 GSK3AP49840 483 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 GBX2P52951 348 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-210ENST00000506767 GABARAPL2P60520 117 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 ALKBH1Q13686 389 aaKnown RBP10.95□□□□□ -0.66
TCOF1-210ENST00000506767 NKPD1Q17RQ9 610 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 CCDC58Q4VC31 144 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 PRSS48Q7RTY5 328 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 LRRC75A-AS1Q8N1F1 130 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 ZCCHC24Q8N2G6 241 aaKnown RBP10.95□□□□□ -0.66
TCOF1-210ENST00000506767 OR51E1Q8TCB6 317 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 RPS4Y2Q8TD47 263 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 GTF3AQ92664 365 aaKnown RBP10.95□□□□□ -0.66
TCOF1-210ENST00000506767 GSX2Q9BZM3 304 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 DYNLRB1Q9NP97 96 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 GPR84Q9NQS5 396 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 BABAM2Q9NXR7 383 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 NKIRAS2Q9NYR9 191 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 ITGB1BP2Q9UKP3 347 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 BLOC1S6Q9UL45 172 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 GTF2A1LQ9UNN4 478 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 PDZD2O15018 2839 aa10.95□□□□□ -0.66
TCOF1-210ENST00000506767 LOC390937A0A1W2PQ73 354 aa10.94□□□□□ -0.66
TCOF1-210ENST00000506767 TRIM64A6NGJ6 449 aa10.94□□□□□ -0.66
TCOF1-210ENST00000506767 GGT3PA6NGU5 568 aa10.94□□□□□ -0.66
TCOF1-210ENST00000506767 ZSCAN5BA6NJL1 495 aa10.94□□□□□ -0.66
TCOF1-210ENST00000506767 OR4C45A6NMZ5 311 aa10.94□□□□□ -0.66
TCOF1-210ENST00000506767 MRPS14O60783 128 aaKnown RBP10.94□□□□□ -0.66
TCOF1-210ENST00000506767 LALBAP00709 142 aa10.94□□□□□ -0.66
TCOF1-210ENST00000506767 MT-ND2P03891 347 aa10.94□□□□□ -0.66
TCOF1-210ENST00000506767 ISG15P05161 165 aa10.94□□□□□ -0.66
TCOF1-210ENST00000506767 ATP6V1B1P15313 513 aa10.94□□□□□ -0.66
TCOF1-210ENST00000506767 ACKR3P25106 362 aa10.94□□□□□ -0.66
TCOF1-210ENST00000506767 PTH2RP49190 550 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms