RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 AMDHD1Q96NU7 426 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 TSSK3Q96PN8 268 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 RNF157Q96PX1 679 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 VAT1Q99536 393 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 GBA3Q9H227 469 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 LRRC19Q9H756 370 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 DDIT4Q9NX09 232 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 GIN1Q9NXP7 522 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 S4R3C0 116 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 NYNRINQ9P2P1 1898 aaKnown RBP1.66□□□□□ -2.14
LINC00616-202ENST00000505874 SVILO95425 2214 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 TICRRQ7Z2Z1 1910 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 PLXND1Q9Y4D7 1925 aa1.66□□□□□ -2.14
LINC00616-202ENST00000505874 UNC80Q8N2C7 3258 aa1.65□□□□□ -2.14
LINC00616-202ENST00000505874 ZFHX2Q9C0A1 2572 aaPredicted RBP1.65□□□□□ -2.14
LINC00616-202ENST00000505874 hCG_1818297A0A087WSY0 165 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TCRBV9S1A1TA0A576 114 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TMEM223A0PJW6 202 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 ZNF850A8MQ14 1090 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 CCL16O15467 120 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 COCHO43405 550 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 HCRTO43612 131 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 CST8O60676 142 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 IL4P05112 153 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 CALCBP10092 127 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 COL8A2P25067 703 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 HTR2AP28223 471 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 OR1E1P30953 314 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 FDFT1P37268 417 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 COILP38432 576 aaPredicted RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 CDKN2BP42772 138 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 KIR3DL2P43630 455 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 IFNAR2P48551 515 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TPI1P60174 286 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 SARNPP82979 210 aaKnown RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 CDK16Q00536 496 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 OGDHQ02218 1023 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 SLC25A11Q02978 314 aaKnown RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 PPIDQ08752 370 aaKnown RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 CDC20Q12834 499 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 AQP6Q13520 282 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 PAFAH1B3Q15102 231 aaKnown RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TAF9Q16594 264 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TMEM41BQ5BJD5 291 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TCEAL5Q5H9L2 206 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 SDHAF4Q5VUM1 108 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 C8orf74Q6P047 294 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TMEM150AQ86TG1 271 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 LINC00523Q86TU6 105 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TAC4Q86UU9 113 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 ZNF573Q86YE8 665 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 CCDC50Q8IVM0 306 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 CDKL3Q8IVW4 592 aaPredicted RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 IFT20Q8IY31 132 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 CENPLQ8N0S6 344 aaPredicted RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 NECAP1Q8NC96 275 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 SPATA4Q8NEY3 305 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 IPMKQ8NFU5 416 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 UFD1Q92890 307 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 FGF13Q92913 245 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 MAGOHBQ96A72 148 aaKnown RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 ISG20Q96AZ6 181 aaKnown RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 ZNF707Q96C28 371 aaPredicted RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TBC1D31Q96DN5 1066 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TMA16Q96EY4 203 aaKnown RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 PELI1Q96FA3 418 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 MSANTD3Q96H12 275 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TSGA13Q96PP4 275 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 CSPG4P5Q96PW8 444 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 XPO6Q96QU8 1125 aaKnown RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 ERP44Q9BS26 406 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 SNRNP25Q9BV90 132 aaKnown RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 CALN1Q9BXU9 219 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 ZYG11BQ9C0D3 744 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 LINC00597Q9H2U6 94 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 DHX35Q9H5Z1 703 aaKnown RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 UGT1A7Q9HAW7 530 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 UGT1A10Q9HAW8 530 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 UGT1A8Q9HAW9 530 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 HMG20AQ9NP66 347 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 GPATCH2LQ9NWQ4 482 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 EPS15L1Q9UBC2 864 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 PCSK1NQ9UHG2 260 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TMCO1Q9UM00 188 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 HPCAL4Q9UM19 191 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 TFR2Q9UP52 801 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 UTP11Q9Y3A2 253 aaKnown RBP1.65□□□□□ -2.15
LINC00616-202ENST00000505874 MFHAS1Q9Y4C4 1052 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 MTCH2Q9Y6C9 303 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 MYLKQ15746 1914 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 ZNF292O60281 2723 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 PCDH15Q96QU1 1955 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 PCNX1Q96RV3 2341 aa1.65□□□□□ -2.15
LINC00616-202ENST00000505874 DNAJC13O75165 2243 aa1.64□□□□□ -2.15
LINC00616-202ENST00000505874 VCANP13611 3396 aa1.64□□□□□ -2.15
LINC00616-202ENST00000505874 NBASA2RRP1 2371 aa1.64□□□□□ -2.15
LINC00616-202ENST00000505874 CACNA1GO43497 2377 aa1.64□□□□□ -2.15
LINC00616-202ENST00000505874 KIAA1549LQ6ZVL6 1849 aa1.64□□□□□ -2.15
LINC00616-202ENST00000505874 SYNJ2BP-COX16A0A087WUM0 186 aa1.64□□□□□ -2.15
LINC00616-202ENST00000505874 A0A087WZY1 265 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms