RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TBPP20226 339 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 CLDN18P56856 261 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 MEF2DQ14814 521 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 FCN2Q15485 313 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 STEAP1BQ6NZ63 245 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 GLDNQ6ZMI3 551 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 BIVMQ86UB2 503 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 LRRC18Q8N456 261 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 OR4C16Q8NGL9 310 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 OR1F12Q8NHA8 337 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 SSC4DQ8WTU2 575 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 FBXO17Q96EF6 278 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 SLC25A21Q9BQT8 299 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 TP63Q9H3D4 680 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 GPR35Q9HC97 309 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 RPL36A-HNRNPH2H7BZ11 118 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 TNFRSF10AO00220 468 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 SYNGR3O43761 229 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 CYB5AP00167 134 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 SLC2A1P11166 492 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZNF24P17028 368 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 ARL6IP1Q15041 203 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 RNPS1Q15287 305 aaKnown RBP15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 ANGPTL5Q86XS5 388 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 CHST5Q9GZS9 411 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZNF319Q9P2F9 582 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 MRPS28Q9Y2Q9 187 aaKnown RBP15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 NOSIPQ9Y314 301 aaKnown RBP15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 RAB27BO00194 218 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 SSNA1O43805 119 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 MRPL33O75394 65 aaKnown RBP15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 CD74P04233 296 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 HCKP08631 526 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 VSIG8P0DPA2 414 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 LINC00303Q3SY05 128 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZNF260Q3ZCT1 412 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 GABRG1Q8N1C3 465 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 TMEM251Q8N6I4 163 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZFP62Q8NB50 900 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 TMEM178AQ8NBL3 297 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 HAS2Q92819 552 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 DACT3Q96B18 629 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 URM1Q9BTM9 101 aaKnown RBP15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 GON7Q9BXV9 100 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 CST11Q9H112 138 aa15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 ALX4Q9H161 411 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC11-204ENST00000505676 MEIKINA0A087WXM9 373 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 ARPC1BO15143 372 aaKnown RBP15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 CREBL2O60519 120 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 GSTP1P09211 210 aaKnown RBP15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 FTH1P19P0C7X4 201 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 ABOP16442 354 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 MPZP25189 248 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 ST3GAL2Q16842 350 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 LINC00696Q6ZRV3 163 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 FAM109AQ8N4B1 249 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 SPICQ8N5J4 248 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 BEX2Q9BXY8 128 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 OR10A4Q9H209 315 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 EXO5Q9H790 373 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 BCO1Q9HAY6 547 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 NPTNQ9Y639 398 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 NCOR1O75376 2440 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 ATP6V1G1O75348 118 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 PTHLHP12272 177 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 VEGFCP49767 419 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 MEOX1P50221 254 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 CEACAM16Q2WEN9 425 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 TMEM255AQ5JRV8 349 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZNF584Q8IVC4 421 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 PAQR4Q8N4S7 273 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 CCDC107Q8WV48 283 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 ASB13Q8WXK3 278 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 SPSB1Q96BD6 273 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 KCNK15Q9H427 330 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 GP6Q9HCN6 339 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 NPDC1Q9NQX5 325 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 NKIRAS2Q9NYR9 191 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 SCP2D1Q9UJQ7 156 aa15.15■□□□□ 0.02
TRAPPC11-204ENST00000505676 UBE2QL1A1L167 161 aa15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 UNC119Q13432 240 aa15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 PNLIPRP3Q17RR3 467 aa15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 RSPO1Q2MKA7 263 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 GLIPR1L1Q6UWM5 242 aa15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 SLC16A14Q7RTX9 510 aa15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 ZNF100Q8IYN0 542 aa15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 ZNF101Q8IZC7 436 aa15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 PIAS4Q8N2W9 510 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 OR10R2Q8NGX6 335 aa15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 LYZL4Q96KX0 146 aa15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 TECTBQ96PL2 329 aa15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 PRRX2Q99811 253 aa15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 MYOZ1Q9NP98 299 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC11-204ENST00000505676 PRR33A8MZF0 331 aa15.13■□□□□ 0.01
TRAPPC11-204ENST00000505676 RAB3DO95716 219 aa15.13■□□□□ 0.01
TRAPPC11-204ENST00000505676 LIPCP11150 499 aa15.13■□□□□ 0.01
TRAPPC11-204ENST00000505676 MAGEA5P43359 124 aa15.13■□□□□ 0.01
TRAPPC11-204ENST00000505676 ZNF626Q68DY1 528 aa15.13■□□□□ 0.01
TRAPPC11-204ENST00000505676 RTL6Q6ICC9 239 aa15.13■□□□□ 0.01
TRAPPC11-204ENST00000505676 Q6ZTK2 550 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms