RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 CHP2O43745 196 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 TSPAN2O60636 221 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 CDC14BO60729 498 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 FBXO24O75426 580 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 STX11O75558 287 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 SC5DO75845 299 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 NCR1O76036 304 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 CDRT1O95170 752 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 TBX6O95947 436 aaPredicted RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 IGHV3-9P01782 118 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 IGHV4-59P01825 116 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 H1F0P07305 194 aaKnown RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 CHRM2P08172 466 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ITGA5P08648 1049 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 CT62P0C5K7 136 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 RRASP10301 218 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ACP2P11117 423 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 S1PR1P21453 382 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ZP3P21754 424 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 UQCRC2P22695 453 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 MAPK3P27361 379 aaPredicted RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 CD80P33681 288 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 TGFBR1P36897 503 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 CDKN2CP42773 168 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 IER3P46695 156 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 MTNR1BP49286 362 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 VEGFCP49767 419 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 XKP51811 444 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 EFNB2P52799 333 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ARFIP1P53367 373 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 TAS2R43P59537 309 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 AP3S2P59780 193 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 IRF8Q02556 426 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 HGFACQ04756 655 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 TNP2Q05952 138 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ZNF763Q0D2J5 394 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 C2orf80Q0P641 193 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 HNRNPA0Q13151 305 aaKnown RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 DYRK1AQ13627 763 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 GALEQ14376 348 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 CPSF6Q16630 551 aaKnown RBP eCLIP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 Q5BKY6 102 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 GPR157Q5UAW9 335 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 PRAMEF8Q5VWM4 474 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 PRAMEF7Q5VXH5 474 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 C18orf63Q68DL7 685 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 SLC35E4Q6ICL7 350 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 PYHIN1Q6K0P9 492 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 REEP3Q6NUK4 255 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ANKRD16Q6P6B7 361 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 BTNL3Q6UXE8 466 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 RRM2BQ7LG56 351 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 KRT74Q7RTS7 529 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 OVCH2Q7RTZ1 564 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ZNF551Q7Z340 670 aaPredicted RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 UBE3DQ7Z6J8 389 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 TSEN54Q7Z6J9 526 aaKnown RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 GPAT4Q86UL3 456 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ANKRD46Q86W74 232 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 CMIPQ8IY22 773 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 KRT78Q8N1N4 520 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 EIF4E3Q8N5X7 224 aaKnown RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 KLHDC1Q8N7A1 406 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 UXS1Q8NBZ7 420 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 SLC37A3Q8NCC5 494 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ZNF680Q8NEM1 530 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ATP6V1C2Q8NEY4 427 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 OR8H1Q8NGG4 311 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 OR10Z1Q8NGY1 313 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 VANGL1Q8TAA9 524 aaPredicted RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 WDR20Q8TBZ3 569 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ZNF431Q8TF32 576 aaPredicted RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 DUSP19Q8WTR2 217 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 LINC00476Q8WZB0 136 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 PHYHIPQ92561 330 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 RFT1Q96AA3 541 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 CIDECQ96AQ7 238 aaPredicted RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 APH1AQ96BI3 265 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 WDR34Q96EX3 536 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 C16orf58Q96GQ5 468 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 APIPQ96GX9 242 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 DMRTB1Q96MA1 342 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 F2RL3Q96RI0 385 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 ZNF607Q96SK3 696 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 NIPSNAP1Q9BPW8 284 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 EFCAB11Q9BUY7 163 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 TSSK6Q9BXA6 273 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 DNTTIP1Q9H147 329 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 POLR2J3Q9H1A7 115 aaKnown RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 MEGF9Q9H1U4 602 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 MIXL1Q9H2W2 232 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 TMEM185BQ9H7F4 350 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 EVA1AQ9H8M9 152 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 EDA2RQ9HAV5 297 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 KRCC1Q9NPI7 259 aaPredicted RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 PLSCR3Q9NRY6 295 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 CYSLTR2Q9NS75 346 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 FARSBQ9NSD9 589 aaKnown RBP3.53□□□□□ -1.84
CPNE4-204ENST00000505331 AHSPQ9NZD4 102 aa3.53□□□□□ -1.84
CPNE4-204ENST00000505331 OR5V1Q9UGF6 321 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms