RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 C17orf50Q8WW18 174 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 CFHR4Q92496 578 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 RORBQ92753 470 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 SEH1LQ96EE3 360 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 C7orf26Q96N11 449 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 SSX3Q99909 188 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 RABEP2Q9H5N1 569 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 ADA2Q9NZK5 511 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 AURKCQ9UQB9 309 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 NOP16Q9Y3C1 178 aaKnown RBP5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 NOTCH3Q9UM47 2321 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 A0A087WUU8 490 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 A0A1W2PQ09 198 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 A0A1W2PRX2 142 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 HTR3EA5X5Y0 456 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 K7EIL1 84 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 DCTN6O00399 190 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 NDUFB3O43676 98 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 AHCYL1O43865 530 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 NDUFB2O95178 105 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 HLA-DQA2P01906 255 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 CD28P10747 220 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 SELLP14151 372 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 IGLL1P15814 213 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 CD33P20138 364 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 ANOS1P23352 680 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 SDHAP31040 664 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 CSNK2BP67870 215 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 ZNF92Q03936 586 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 TRAP1Q12931 704 aaKnown RBP5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 HABP2Q14520 560 aaPredicted RBP5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 PCK2Q16822 640 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 SNAI3Q3KNW1 292 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 ANKDD1AQ495B1 522 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 GPR139Q6DWJ6 353 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 NANOGP8Q6NSW7 305 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 C11orf88Q6PI97 169 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 DNM1P34Q6PK57 102 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 TBPL2Q6SJ96 375 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 METAP1DQ6UB28 335 aaPredicted RBP5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 PTCHD4Q6ZW05 846 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 RRM2BQ7LG56 351 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 SLC36A1Q7Z2H8 476 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 VTCN1Q7Z7D3 282 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 OFCC1Q8IZS5 231 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 Q8N7P7 452 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 OR4F17Q8NGA8 305 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 OR5T2Q8NGG2 359 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 OR56B2PQ8NGI1 322 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 OR2AJ1Q8NGZ0 328 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 OR8S1Q8NH09 359 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 NPRL2Q8WTW4 380 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 ACOT11Q8WXI4 607 aaPredicted RBP5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 FAM46AQ96IP4 442 aaKnown RBP5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 OR4F4Q96R69 305 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 OR5M11Q96RB7 305 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 ATF6BQ99941 703 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 NPFFR1Q9GZQ6 430 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 SLC22A4Q9H015 551 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 NSRP1Q9H0G5 558 aaKnown RBP5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 NMNAT1Q9HAN9 279 aaPredicted RBP5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 VSX1Q9NZR4 365 aaPredicted RBP5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 MAB21L2Q9Y586 359 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 N6AMT1Q9Y5N5 214 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 IER3IP1Q9Y5U9 82 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 SNX13Q9Y5W8 968 aa5.63□□□□□ -1.51
NPIPB3-203ENST00000504841 LOC100653049A0A140TA62 436 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 M0R135 149 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 ACOT8O14734 319 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 FFAR1O14842 300 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 ANGPTL7O43827 346 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 CHST1O43916 411 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 GMDSO60547 372 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 PEX14O75381 377 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 KRT34O76011 436 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 PPP1R3DO95685 299 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 PTBP3O95758 552 aaKnown RBP5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 ZNF682O95780 498 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 TFF1P04155 84 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 IFNW1P05000 195 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 TROVE2P10155 538 aaKnown RBP eCLIP5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 SLC2A1P11166 492 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 POU1F1P28069 291 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 CRABP1P29762 137 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 KDELR2P33947 212 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 MDH1P40925 334 aaKnown RBP5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 CDKN2AP42771 156 aaKnown RBP5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 KIR2DS4P43632 304 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 BMXP51813 675 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 TPTEP56180 551 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 HIST1H3AP68431 136 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 CD69Q07108 199 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 CYLC2Q14093 348 aaPredicted RBP5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 KCNMB1Q16558 191 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 MICBQ29980 383 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 RSPO1Q2MKA7 263 aaPredicted RBP5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 LRRC75BQ2VPJ9 315 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 RFX4Q33E94 735 aa5.62□□□□□ -1.51
NPIPB3-203ENST00000504841 PLA1AQ53H76 456 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms