RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ANKRD34CP0C6C1 535 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 EDDM3AQ14507 147 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 HAGHLQ6PII5 290 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-207ENST00000504761 FAM198BQ6UWH4 519 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 TRMT61AQ96FX7 289 aaKnown RBP12.55□□□□□ -0.4
TCOF1-207ENST00000504761 KCNK15Q9H427 330 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 LYZL6O75951 148 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 IGHA1P01876 353 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 SORDQ00796 357 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 PLPPR5Q32ZL2 321 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 DMKNQ6E0U4 476 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-207ENST00000504761 JMJD6Q6NYC1 403 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-207ENST00000504761 PCNPQ8WW12 178 aaKnown RBP12.55□□□□□ -0.4
TCOF1-207ENST00000504761 HAO2Q9NYQ3 351 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 FRRS1LQ9P0K9 344 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 ANAPC1Q9H1A4 1944 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 IGHV1-45A0A0A0MS14 117 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 SULT1B1O43704 296 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 TAS2R46P59540 309 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 FGL1Q08830 312 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 ASAH1Q13510 395 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 RBM39Q14498 530 aaKnown RBP12.54□□□□□ -0.4
TCOF1-207ENST00000504761 PABPC1L2AQ5JQF8 200 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 CCDC71LQ8N9Z2 235 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 OR51A4Q8NGJ6 313 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 LRRC20Q8TCA0 184 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 EMG1Q92979 244 aaKnown RBP12.54□□□□□ -0.4
TCOF1-207ENST00000504761 ITPKCQ96DU7 683 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 A0A0J9YW62 118 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 OR6C6A6NF89 314 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 OR6C65A6NJZ3 312 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 TEX46H3BTG2 121 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 RPA2P15927 270 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 SPNP16150 400 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 AGTR1P30556 359 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 HAAOP46952 286 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 NCCRP1Q6ZVX7 275 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-207ENST00000504761 TUSC5Q8IXB3 177 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 DEFB108BQ8NET1 73 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 LIN37Q96GY3 246 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-207ENST00000504761 TAS2R5Q9NYW4 299 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 MUC6Q6W4X9 2439 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 SLC17A2O00624 439 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 LPLP06858 475 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 GP1BAP07359 652 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 PRKACAP17612 351 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 RFX2P48378 723 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 IRF3Q14653 427 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 BCL2A1Q16548 175 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 PHLDA2Q53GA4 152 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 RHOUQ7L0Q8 258 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 OR6X1Q8NH79 312 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 CMBLQ96DG6 245 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 UBQLN2Q9UHD9 624 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 NUP50Q9UKX7 468 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 ZNHIT1O43257 154 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 FADS1O60427 444 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 UBBP0CG47 229 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 ADH6P28332 368 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 TAS2R31P59538 309 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-207ENST00000504761 PTDSS2Q9BVG9 487 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 SMIM3Q9BZL3 60 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 CYSLTR2Q9NS75 346 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 AKAP6Q13023 2319 aa12.54□□□□□ -0.4
TCOF1-207ENST00000504761 ARR3P36575 388 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 EDDM3BP56851 147 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 WFDC8Q8IUA0 241 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 APCDD1LQ8NCL9 501 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 TGIF2Q9GZN2 237 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 ZNF780AO75290 641 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-207ENST00000504761 ASAH2BP0C7U1 165 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 FBXW12Q6X9E4 464 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 SLC7A5P1Q8MH63 180 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 MFSD4AQ8N468 514 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 LOXL4Q96JB6 756 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 HES7Q9BYE0 225 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 C12orf4Q9NQ89 552 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 KLHDC2Q9Y2U9 406 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 HSPB2A8KAH6 182 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 MGMTP16455 207 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 BMP5P22003 454 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 HSPB2Q16082 182 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 PAN3Q58A45 887 aaKnown RBP12.53□□□□□ -0.4
TCOF1-207ENST00000504761 SLC25A30Q5SVS4 291 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 OR4S1Q8NGB4 309 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 OIT3Q8WWZ8 545 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 BCO1Q9HAY6 547 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 ENY2Q9NPA8 101 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 TRAPPC4Q9Y296 219 aa12.53□□□□□ -0.4
TCOF1-207ENST00000504761 M0R1B8 84 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 CCSO14618 274 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 WNT11O96014 354 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 CRYAAP02489 173 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 PMP22Q01453 160 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 ZMYND11Q15326 602 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 BARHL1Q9BZE3 327 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 GNG12Q9UBI6 72 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 LINC01387J3KSC0 135 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 ADAM11O75078 769 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms