RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MRGPRGQ86SM5 289 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 RPLP0P6Q8NHW5 317 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 TMED6Q8WW62 240 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF486Q96H40 463 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-204ENST00000504430 ANKRD36BP1Q96IX9 119 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 CDC7O00311 574 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 ZG16O60844 167 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 CRYAAP02489 173 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 PGA4P0DJD7 388 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 PGA3P0DJD8 388 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 CD37P11049 281 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 CD1EP15812 388 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 ALOX5APP20292 161 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 RPS9P46781 194 aaKnown RBP4.32□□□□□ -1.72
NIPBL-204ENST00000504430 OR1D4P47884 311 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 RND2P52198 227 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF133P52736 654 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-204ENST00000504430 SUB1P53999 127 aaKnown RBP eCLIP4.32□□□□□ -1.72
NIPBL-204ENST00000504430 PFN3P60673 137 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 HSF1Q00613 529 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF154Q13106 437 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 RASSF6Q6ZTQ3 369 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 UBL4BQ8N7F7 174 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 OR51S1Q8NGJ8 323 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 OR2T4Q8NH00 348 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 DNASE2BQ8WZ79 361 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 FOPNLQ96NB1 174 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 SNAPC4Q5SXM2 1469 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 FKBP6O75344 327 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 RLN2P04090 185 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 RPLP0P05388 317 aaKnown RBP4.31□□□□□ -1.72
NIPBL-204ENST00000504430 GTF2F2P13984 249 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 CEACAM8P31997 349 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-204ENST00000504430 ZFP36L2P47974 494 aaKnown RBP4.31□□□□□ -1.72
NIPBL-204ENST00000504430 FMODQ06828 376 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 HECTD2Q5U5R9 776 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 ZFP1Q6P2D0 407 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 MRPL52Q86TS9 123 aaKnown RBP4.31□□□□□ -1.72
NIPBL-204ENST00000504430 ZADH2Q8N4Q0 377 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 ALKBH3Q96Q83 286 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-204ENST00000504430 OR51J1Q9H342 316 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 PLAC1Q9HBJ0 212 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 TP53TG1Q9Y2A0 90 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 TAF1LQ8IZX4 1826 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 CNTLNQ9NXG0 1405 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 CEACAM18A8MTB9 384 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 M0QZK8 103 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 PFDN1O60925 122 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 LINC00271P0C7V0 271 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 PGA5P0DJD9 388 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 SLC2A5P22732 501 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 SHC1P29353 583 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 FOXN2P32314 431 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 SERPINB5P36952 375 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 AKR1C3P42330 323 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 AP1S2P56377 157 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 IFITM2Q01629 132 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 ASPRV1Q53RT3 343 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 SIRPB2Q5JXA9 342 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 P2RY8Q86VZ1 359 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 STX19Q8N4C7 294 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 ZNRF1Q8ND25 227 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 OR4D10Q8NGI6 311 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 LHFPL5Q8TAF8 219 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 REEP1Q9H902 201 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 Q9HAA7 133 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 KCNJ16Q9NPI9 418 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 WRAP73Q9P2S5 460 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-204ENST00000504430 NID2Q14112 1375 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 OR11H12B2RN74 326 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 OR2J2O76002 312 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 IGKV1D-16P01601 117 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 S100GP29377 79 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 CA13Q8N1Q1 262 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 GAPTQ8N292 157 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 OR11H1Q8NG94 326 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 OR11H2Q8NH07 326 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 C17orf77Q96MU5 243 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 C19orf25Q9UFG5 118 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-204ENST00000504430 NEU3Q9UQ49 428 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 ZMYM2Q9UBW7 1377 aa4.31□□□□□ -1.72
NIPBL-204ENST00000504430 TNFRSF13BO14836 293 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-204ENST00000504430 KIF1BO60333 1816 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 CNMDO75829 334 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 GGT1P19440 569 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 TAS2R39P59534 338 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 RPL24P83731 157 aaKnown RBP4.3□□□□□ -1.72
NIPBL-204ENST00000504430 TFAMQ00059 246 aaKnown RBP4.3□□□□□ -1.72
NIPBL-204ENST00000504430 RSU1Q15404 277 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 VAX1Q5SQQ9 334 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 C1orf195Q5TG92 126 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 SFXN4Q6P4A7 337 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 CCDC171Q6TFL3 1326 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 MUC15Q8N387 334 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 TMEM86BQ8N661 226 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 OR8U1Q8NH10 309 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 OR51E1Q8TCB6 317 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 SLC37A2Q8TED4 501 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 TMED9Q9BVK6 235 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 TAPBPLQ9BX59 468 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms