RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 FAM3AP98173 230 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 LRRC36Q1X8D7 754 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 LPCAT4Q643R3 524 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 ENTHD1Q8IYW4 607 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 GALNT4Q8N4A0 578 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 OR10AD1Q8NGE0 317 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 OR56B2PQ8NGI1 322 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 RHOXF1Q8NHV9 184 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 ITLN1Q8WWA0 313 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 CCL17Q92583 94 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 MEGF10Q96KG7 1140 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 NOP16Q9Y3C1 178 aaKnown RBP15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 ZANQ9Y493 2812 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 CLDN25C9JDP6 229 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 CD5LO43866 347 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 APOL3O95236 402 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 IGHV4-31P0DP07 118 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 MTNR1AP48039 350 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 SRP9P49458 86 aaKnown RBP15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 MMP16P51512 607 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 SLC3A1Q07837 685 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 Q71RC1 249 aaPredicted RBP15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 HPS1Q92902 700 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 TTTY10Q9BZA0 68 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 DCLRE1BQ9H816 532 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 FAM206AQ9NX38 181 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 ZNF391Q9UJN7 358 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 IKZF2Q9UKS7 526 aa15.42■□□□□ 0.06
PDLIM7-209ENST00000503346 TMEM269A0A1B0GVZ9 245 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 A0A1W2PQL4 384 aaPredicted RBP15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 LRP5LA4QPB2 252 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 SNTNA6NMZ2 147 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 F5H5P2 479 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 HLA-DPB1P04440 258 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 ATP6V1E1P36543 226 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 GZMKP49863 264 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 ZNF829Q3KNS6 432 aaPredicted RBP15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 OGFRL1Q5TC84 451 aaPredicted RBP15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 SSX6Q7RTT6 188 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 CELF2-AS1Q8N7Q2 184 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 ZNF555Q8NEP9 628 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 OR10H4Q8NGA5 316 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 OR8B12Q8NGG6 310 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 APOL4Q9BPW4 351 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 TMEM106BQ9NUM4 274 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 TREM2Q9NZC2 230 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 MRM2Q9UI43 246 aaKnown RBP15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 CR1P17927 2039 aa15.41■□□□□ 0.06
PDLIM7-209ENST00000503346 CHD3Q12873 2000 aaKnown RBP15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 A0A0U1RQV5 110 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 J3QRE1 110 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 GMDSO60547 372 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 SRSF10O75494 262 aaKnown RBP15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 CA6P23280 308 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 CD200P41217 278 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 GATA4P43694 442 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 GSK3AP49840 483 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 OR8B8Q15620 311 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 GFOD2Q3B7J2 385 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 ZNF684Q5T5D7 378 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 KLBQ86Z14 1044 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 RAB1CQ92928 201 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 RNFT2Q96EX2 444 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 TIMD4Q96H15 378 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 Q96MT0 163 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 TBX5Q99593 518 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 GCM1Q9NP62 436 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 AASSQ9UDR5 926 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 NUFIP1Q9UHK0 495 aaKnown RBP15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 PPP1R3CQ9UQK1 317 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 WIPI2Q9Y4P8 454 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 CSPG4Q6UVK1 2322 aa15.4■□□□□ 0.06
PDLIM7-209ENST00000503346 ANKRD30BLA7E2S9 258 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 IFNL4K9M1U5 179 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 WNT9BO14905 357 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 MAGEB4O15481 346 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 SULT1C4O75897 302 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 PNPP00491 289 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 IGLV3-1P01715 115 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 KRT8P05787 483 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 IL2RGP31785 369 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 MAB21L1Q13394 359 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 OR8G1Q15617 311 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 SNCBQ16143 134 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 AVPI1Q5T686 147 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 CYB5R2Q6BCY4 276 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 SPERTQ8NA61 448 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 CSNK2A3Q8NEV1 391 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 CLDND2Q8NHS1 167 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 ITFG2Q969R8 447 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 C1orf159Q96HA4 380 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 LYZL4Q96KX0 146 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 ADAT1Q9BUB4 502 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 PBOV1Q9GZY1 135 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 MOB1AQ9H8S9 216 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 DCAF16Q9NXF7 216 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 R4GMQ9 66 aa15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 ANK3Q12955 4377 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-209ENST00000503346 PTBP3O95758 552 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-209ENST00000503346 ACTC1P68032 377 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms