RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 GMEB2Q9UKD1 530 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 VSIG4Q9Y279 399 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 DTX4Q9Y2E6 619 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 TRAV18A0A075B6X5 111 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 TBC1D3DA0A087WVF3 549 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 A0A1B0GTH9 108 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 C9orf170A2RU37 121 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 TBC1D3LB9A6J9 549 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 FAM157AC9JC47 383 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 MASP2O00187 686 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 CDC14BO60729 498 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 ZNF217O75362 1048 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 PNPP00491 289 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 TBC1D3HP0C7X1 549 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 GTF2F2P13984 249 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 PTNP21246 168 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 DRD1P21728 446 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 ACHEP22303 614 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 MAS1LP35410 378 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 THBS4P35443 961 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 RFC3P40938 356 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 PMELP40967 661 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 ID2Q02363 134 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 RPL18Q07020 188 aaKnown RBP3.47□□□□□ -1.85
CLTC-209ENST00000498711 SGCGQ13326 291 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 ZNHIT3Q15649 155 aaPredicted RBP3.47□□□□□ -1.85
CLTC-209ENST00000498711 ALG10Q5BKT4 473 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 TBC1D3CQ6IPX1 549 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 CCDC144NLQ6NUI1 221 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 RPUSD3Q6P087 351 aaKnown RBP3.47□□□□□ -1.85
CLTC-209ENST00000498711 C3orf33Q6P1S2 294 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 CORO6Q6QEF8 472 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 DEGS2Q6QHC5 323 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 IL34Q6ZMJ4 242 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 Q6ZSR3 168 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 TAF8Q7Z7C8 310 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 ZNF546Q86UE3 836 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 TMPRSS12Q86WS5 348 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 SKA3Q8IX90 412 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 TBC1D3Q8IZP1 549 aaPredicted RBP3.47□□□□□ -1.85
CLTC-209ENST00000498711 CARFQ8N187 725 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 SPEM1Q8N4L4 309 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 ZNF433Q8N7K0 673 aaPredicted RBP3.47□□□□□ -1.85
CLTC-209ENST00000498711 C11orf44Q8N8P7 122 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 TMEM185AQ8NFB2 350 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 STEAP2Q8NFT2 490 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 OR51L1Q8NGJ5 315 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 OR1J4Q8NGS1 313 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 OR10K1Q8NGX5 313 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 OR4C3Q8NH37 302 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 SSC4DQ8WTU2 575 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 RNF138Q8WVD3 245 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 FAM168AQ92567 244 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 PIK3IP1Q96FE7 263 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 INTS14Q96SY0 518 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 AMELYQ99218 206 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 SLC6A7Q99884 636 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 PLA2G2FQ9BZM2 168 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 TMEM185BQ9H7F4 350 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 UCK1Q9HA47 277 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.47□□□□□ -1.85
CLTC-209ENST00000498711 PISDQ9UG56 409 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 ZNF230Q9UIE0 474 aaPredicted RBP3.47□□□□□ -1.85
CLTC-209ENST00000498711 KLK13Q9UKR3 277 aa3.47□□□□□ -1.85
CLTC-209ENST00000498711 MRPS18BQ9Y676 258 aaKnown RBP3.47□□□□□ -1.85
CLTC-209ENST00000498711 FXYD6-FXYD2A0A087WZ82 144 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 A0A1W2PQF6 199 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 FOXI3A8MTJ6 420 aaPredicted RBP3.46□□□□□ -1.86
CLTC-209ENST00000498711 H3BMH7 237 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 ALOX12BO75342 701 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 SLC25A12O75746 678 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 KDM4BO94953 1096 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 RAB3DO95716 219 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 RENP00797 406 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 MT-ATP6P00846 226 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 CSTAP01040 98 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 APODP05090 189 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 IL11P20809 199 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 HSD11B1P28845 292 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 CBX5P45973 191 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 SLC6A8P48029 635 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 ZNF84P51523 738 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 MAZP56270 477 aaKnown RBP3.46□□□□□ -1.86
CLTC-209ENST00000498711 FAM3BP58499 235 aaPredicted RBP3.46□□□□□ -1.86
CLTC-209ENST00000498711 PMPCAQ10713 525 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 DHRS2Q13268 280 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 SNTB1Q13884 538 aaKnown RBP3.46□□□□□ -1.86
CLTC-209ENST00000498711 GPR18Q14330 331 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 CD226Q15762 336 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 TOMM34Q15785 309 aaPredicted RBP3.46□□□□□ -1.86
CLTC-209ENST00000498711 ITPRIPL2Q3MIP1 535 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 PEG10Q86TG7 708 aaKnown RBP3.46□□□□□ -1.86
CLTC-209ENST00000498711 HOGA1Q86XE5 327 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 CCDC36Q8IYA8 594 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 GALNT16Q8N428 558 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 CSNK1A1LQ8N752 337 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 TMEM105Q8N8V8 129 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 C7orf57Q8NEG2 295 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 OR51A4Q8NGJ6 313 aa3.46□□□□□ -1.86
CLTC-209ENST00000498711 DUSP19Q8WTR2 217 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms