RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 KLBQ86Z14 1044 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 MUC20Q8N307 709 aaPredicted RBP13.49□□□□□ -0.25
NR1H3-227ENST00000498548 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.49□□□□□ -0.25
NR1H3-227ENST00000498548 THEM6Q8WUY1 208 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 SGK3Q96BR1 496 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 SLC6A7Q99884 636 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 ADAT1Q9BUB4 502 aaKnown RBP13.49□□□□□ -0.25
NR1H3-227ENST00000498548 PPP1R3EQ9H7J1 279 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 YY1AP1Q9H869 796 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 MARCH7Q9H992 704 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 ZNF319Q9P2F9 582 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 PPIAL4AQ9Y536 164 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 LRRC30A6NM36 301 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 GRPP07492 148 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 ANXA8P13928 327 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 ZNF12P17014 697 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 PAICSP22234 425 aaKnown RBP13.48□□□□□ -0.25
NR1H3-227ENST00000498548 GATA3P23771 443 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 NAA10P41227 235 aaPredicted RBP13.48□□□□□ -0.25
NR1H3-227ENST00000498548 GATA4P43694 442 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 SLC15A1P46059 708 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 HCCSP53701 268 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 ZNF121P58317 390 aaPredicted RBP13.48□□□□□ -0.25
NR1H3-227ENST00000498548 ZNF181Q2M3W8 571 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 GFOD2Q3B7J2 385 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 ZNF404Q494X3 552 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 SFRP4Q6FHJ7 346 aaPredicted RBP13.48□□□□□ -0.25
NR1H3-227ENST00000498548 ZNF826PQ6ZT77 177 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 SHFQ7M4L6 423 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 C1orf87Q8N0U7 546 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 SEMA6DQ8NFY4 1073 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 OR11L1Q8NGX0 322 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 ZNF418Q8TF45 676 aaPredicted RBP13.48□□□□□ -0.25
NR1H3-227ENST00000498548 RNF133Q8WVZ7 376 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 REEP6Q96HR9 211 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 TVP23BQ9NYZ1 205 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 INSIG2Q9Y5U4 225 aa13.48□□□□□ -0.25
NR1H3-227ENST00000498548 PPIAL4CA0A0B4J2A2 164 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 XRCC2O43543 280 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 GMDSO60547 372 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 HMGN1P05114 100 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 H2BFMP0C1H6 154 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 CD80P33681 288 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 DAPP51397 102 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 RPS7P62081 194 aaKnown RBP13.47□□□□□ -0.25
NR1H3-227ENST00000498548 GNB2P62879 340 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 FAM3AP98173 230 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 TIGD6Q17RP2 521 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 SLC16A9Q7RTY1 509 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 PRSS45Q7RTY3 260 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 CELF2-AS1Q8N7Q2 184 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 NEIL1Q96FI4 390 aaPredicted RBP13.47□□□□□ -0.25
NR1H3-227ENST00000498548 PGAM5Q96HS1 289 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 PLEKHA8Q96JA3 519 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 SSBP3Q9BWW4 388 aaPredicted RBP13.47□□□□□ -0.25
NR1H3-227ENST00000498548 TOR3AQ9H497 397 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 C1orf123Q9NWV4 160 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 RNF7Q9UBF6 113 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 MIOXQ9UGB7 285 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 KLHDC2Q9Y2U9 406 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 POLR3KQ9Y2Y1 108 aaPredicted RBP13.47□□□□□ -0.25
NR1H3-227ENST00000498548 AUP1Q9Y679 476 aa13.47□□□□□ -0.25
NR1H3-227ENST00000498548 IGHV3OR16-10A0A075B7F0 116 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 A8MXK9 166 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 FSHBP01225 129 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 HOXB6P17509 224 aaKnown RBP13.46□□□□□ -0.25
NR1H3-227ENST00000498548 OPRL1P41146 370 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 CRISP1P54107 249 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 POU4F2Q12837 409 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 APOFQ13790 326 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 SNAPC1Q16533 368 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 KLF17Q5JT82 389 aaPredicted RBP13.46□□□□□ -0.25
NR1H3-227ENST00000498548 BCL6BQ8N143 479 aaPredicted RBP13.46□□□□□ -0.25
NR1H3-227ENST00000498548 TEX29Q8N6K0 151 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 Q8TCH9 128 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 ERGIC1Q969X5 290 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 UTP4Q969X6 686 aaKnown RBP13.46□□□□□ -0.25
NR1H3-227ENST00000498548 SPSB4Q96A44 273 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 SLC22A4Q9H015 551 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 FN3KRPQ9HA64 309 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 SLC25A19Q9HC21 320 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 MRPL15Q9P015 296 aaKnown RBP13.46□□□□□ -0.25
NR1H3-227ENST00000498548 KIF17Q9P2E2 1029 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 OR5V1Q9UGF6 321 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 LRCH1Q9Y2L9 728 aa13.46□□□□□ -0.25
NR1H3-227ENST00000498548 A0A0A6YYJ9 748 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 A6NLC8 198 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 ANKRD30BLA7E2S9 258 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 C3orf80F5H4A9 247 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 PSMD9O00233 223 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 MITFO75030 526 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-227ENST00000498548 LYNP07948 512 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 SLC2A5P22732 501 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 SCGB2A2Q13296 93 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 ARMCX4Q5H9R4 360 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 LRRN1Q6UXK5 716 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-227ENST00000498548 BPIFB2Q8N4F0 458 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 OR8B3Q8NGG8 313 aa13.45□□□□□ -0.26
NR1H3-227ENST00000498548 OR5K1Q8NHB7 308 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms