RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 M0R135 149 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 KRT34O76011 436 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 LHBP01229 141 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 GGT2P36268 569 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 KLRD1Q13241 179 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 C11orf91Q3C1V1 193 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 SLC35E4Q6ICL7 350 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 METAP1DQ6UB28 335 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-212ENST00000498540 FKBP9P1Q75LS8 142 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 CBLL1Q75N03 491 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 LY6G5BQ8NDX9 201 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 OR2AJ1Q8NGZ0 328 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 ZNF799Q96GE5 643 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 MAP6Q96JE9 813 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 ERMAPQ96PL5 475 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-212ENST00000498540 NMNAT3Q96T66 252 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 SIKE1Q9BRV8 207 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 PPA2Q9H2U2 334 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 FN3KQ9H479 309 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 RPRD1BQ9NQG5 326 aaKnown RBP12.06□□□□□ -0.48
TRAF4-212ENST00000498540 GID8Q9NWU2 228 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 ADA2Q9NZK5 511 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 SIGLEC9Q9Y336 463 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 ENPP4Q9Y6X5 453 aa12.06□□□□□ -0.48
TRAF4-212ENST00000498540 TRBV4-1A0A0J9YWV2 114 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 A0A1W2PRQ8 180 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 GGT3PA6NGU5 568 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 UNC119BA6NIH7 251 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 CXCR6O00574 342 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 NPFFO15130 113 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 SERPINA1P01009 418 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 H1F0P07305 194 aaKnown RBP12.05□□□□□ -0.48
TRAF4-212ENST00000498540 TPTEP56180 551 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 DGCR6Q14129 220 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 HERPUD1Q15011 391 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 SEC23BQ15437 767 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 PCK2Q16822 640 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 RFX4Q33E94 735 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 FGD3Q5JSP0 725 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 GLYATL3Q5SZD4 288 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 Q6ZTK2 550 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 LNX2Q8N448 690 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 PNKDQ8N490 385 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 GALNT4Q8N4A0 578 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 FAM216BQ8N7L0 139 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 Q8N7P7 452 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 C11orf44Q8N8P7 122 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 NPRL2Q8WTW4 380 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 CCL13Q99616 98 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 MRPL22Q9NWU5 206 aaKnown RBP12.05□□□□□ -0.48
TRAF4-212ENST00000498540 MRPL15Q9P015 296 aaKnown RBP12.05□□□□□ -0.48
TRAF4-212ENST00000498540 FBLN5Q9UBX5 448 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 FOXJ3Q9UPW0 622 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 AURKCQ9UQB9 309 aa12.05□□□□□ -0.48
TRAF4-212ENST00000498540 CAB39Q9Y376 341 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-212ENST00000498540 ANKRD61A6NGH8 418 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 HLA-DQA2P01906 255 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 HIST1H1CP16403 213 aaKnown RBP12.04□□□□□ -0.48
TRAF4-212ENST00000498540 GABRA5P31644 462 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 RPS27P42677 84 aaKnown RBP12.04□□□□□ -0.48
TRAF4-212ENST00000498540 LIPEQ05469 1076 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 MAPRE2Q15555 327 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 SLC36A3Q495N2 470 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 WDR38Q5JTN6 314 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 SMARCD3Q6STE5 483 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 WDR86Q86TI4 376 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 ZBTB46Q86UZ6 589 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 CYP4Z1Q86W10 505 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 SLC15A3Q8IY34 581 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 OR56B2PQ8NGI1 322 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 OR4K13Q8NH42 304 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 FANK1Q8TC84 345 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 SEH1LQ96EE3 360 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 TOR3AQ9H497 397 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 SAR1AQ9NR31 198 aa12.04□□□□□ -0.48
TRAF4-212ENST00000498540 OR6C68A6NDL8 312 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-212ENST00000498540 BHLHE40O14503 412 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 GPR37O15354 613 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 RENP00797 406 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 TROVE2P10155 538 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRAF4-212ENST00000498540 PSKH1P11801 424 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 EEF1B2P24534 225 aaKnown RBP12.03□□□□□ -0.48
TRAF4-212ENST00000498540 OTX1P32242 354 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-212ENST00000498540 SAA4P35542 130 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 EFNB2P52799 333 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 GUCA2AQ02747 115 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 SF3A3Q12874 501 aaKnown RBP eCLIP12.03□□□□□ -0.482e-6■■□□□ 11.8
TRAF4-212ENST00000498540 C1orf122Q6ZSJ8 110 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 REC114Q7Z4M0 266 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 C11orf53Q8IXP5 236 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 CMTM4Q8IZR5 234 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 SPERTQ8NA61 448 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 OR5R1Q8NH85 324 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 PPP1R35Q8TAP8 253 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 MRAPQ8TCY5 172 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 LRRC29Q8WV35 223 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 TNFRSF14Q92956 283 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 SPTSSAQ969W0 71 aa12.03□□□□□ -0.48
TRAF4-212ENST00000498540 RCN3Q96D15 328 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms