RNA–Protein interactions for RNA: ENST00000498528.1

KDM3A-215, Transcript of lysine demethylase 3A, human

TSL 3

Gene KDM3A, Length 352 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3A-215	ENST00000498528	LSM6	P62312	80 aa	Known RBP	4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	VSNL1	P62760	191 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	ACSM1	Q08AH1	577 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	KRR1	Q13601	381 aa	Known RBP	4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	NFYC	Q13952	458 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	PCK2	Q16822	640 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	TMEM95	Q3KNT9	176 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	KLHL22	Q53GT1	634 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	LRRC10	Q5BKY1	277 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	METAP1D	Q6UB28	335 aa	Predicted RBP	4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	FUNDC1	Q8IVP5	155 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	FAM185A	Q8N0U4	392 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	DTX3	Q8N9I9	347 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	LRRC75A	Q8NAA5	344 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	LY6G5B	Q8NDX9	201 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	OR2AJ1	Q8NGZ0	328 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	OR10A6	Q8NH74	314 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	OR2AE1	Q8NHA4	323 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	LRRC8C	Q8TDW0	803 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	RASSF5	Q8WWW0	418 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	LIPH	Q8WWY8	451 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	TPD52L3	Q96J77	140 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	COQ7	Q99807	217 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	ASCL2	Q99929	193 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	NUAK2	Q9H093	628 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	ZNF702P	Q9H963	129 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	ELL3	Q9HB65	397 aa	Predicted RBP	4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	C14orf119	Q9NWQ9	140 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	ZNF391	Q9UJN7	358 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	BAG5	Q9UL15	447 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	PRPF19	Q9UMS4	504 aa	Known RBP	4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	SF3B6	Q9Y3B4	125 aa	Known RBP	4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	LHFPL6	Q9Y693	200 aa		4.89	□□□□□ -1.63
KDM3A-215	ENST00000498528	TCRBV4S1A1T	A0A5B7	111 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	TMEM120B	A0PK00	339 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	C3orf84	H3BNL1	204 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	BHLHE40	O14503	412 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	ANGPT2	O15123	496 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	GMDS	O60547	372 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	SNN	O75324	88 aa	Predicted RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	CLIC3	O95833	236 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	HLA-DQA2	P01906	255 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	CD14	P08571	375 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	FAH	P16930	419 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	IFNA8	P32881	189 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	GRK5	P34947	590 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	VDAC2	P45880	294 aa	Predicted RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	GABRA2	P47869	451 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	CAPZA1	P52907	286 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	TPTE	P56180	551 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	LGALS4	P56470	323 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	WDR4	P57081	412 aa	Known RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	CSNK2B	P67870	215 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	COL10A1	Q03692	680 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	ZNF92	Q03936	586 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	MZT1	Q08AG7	82 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	ST3GAL3	Q11203	375 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	TRAP1	Q12931	704 aa	Known RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	SNAI3	Q3KNW1	292 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	LRRC23	Q53EV4	343 aa	Predicted RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	EPGN	Q6UW88	154 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	DLEU7	Q6UYE1	221 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	ZNF730	Q6ZMV8	503 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	CFAP77	Q6ZQR2	320 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	RRM2B	Q7LG56	351 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	DPY19L4	Q7Z388	723 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	OR5AU1	Q8NGC0	362 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	OR9Q1	Q8NGQ5	310 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	C8orf46	Q8TAG6	207 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	TNFRSF14	Q92956	283 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	DUS3L	Q96G46	650 aa	Known RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	RCC1L	Q96I51	464 aa	Known RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	TSSK2	Q96PF2	358 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	ATF6B	Q99941	703 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	CDCA4	Q9BXL8	241 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	NDEL1	Q9GZM8	345 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	PRSS22	Q9GZN4	317 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	SLC22A4	Q9H015	551 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	METTL8	Q9H825	291 aa	Known RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	SRA1	Q9HD15	236 aa	Known RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	PALMD	Q9NP74	551 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	SSU72	Q9NP77	194 aa	Known RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	ABCB10	Q9NRK6	738 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	KAAG1	Q9UBP8	84 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	NDUFAF1	Q9Y375	327 aa		4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.88	□□□□□ -1.63
KDM3A-215	ENST00000498528		A0A1B0GWJ7	208 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	ANKRD30BL	A7E2S9	258 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528		J3KTA2	159 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528		M0R135	149 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	TBX1	O43435	398 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	IGF2	P01344	180 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	TROVE2	P10155	538 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	SLC2A1	P11166	492 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	MUC1	P15941	1255 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	PAICS	P22234	425 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms