RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 WWP2O00308 870 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CXCR6O00574 342 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 NDC80O14777 642 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 LIN7AO14910 233 aaPredicted RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 SCAMP2O15127 329 aaKnown RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 EFNA2O43921 213 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CCDC22O60826 627 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 RAMP1O60894 148 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 FKBP6O75344 327 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 BCAS2O75934 225 aaPredicted RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 DCTN3O75935 186 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 ZNF682O95780 498 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CATP04040 527 aaKnown RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 CSF2P04141 144 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 SEMG1P04279 462 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 C8GP07360 202 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 PSKH1P11801 424 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CTSEP14091 401 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 GGT1P19440 569 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 HTR2AP28223 471 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 FMO3P31513 532 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 S100A3P33764 101 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TRPC1P48995 793 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TGM4P49221 684 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 RGS4P49798 205 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 DAPP51397 102 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 ACTR3P61158 418 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 RPL32P62910 135 aaKnown RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 IL1RL1Q01638 556 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 PLOD1Q02809 727 aaPredicted RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 PRDX1Q06830 199 aaKnown RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 ASPHQ12797 758 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 BNIP2Q12982 314 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CBX3Q13185 183 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TOMM34Q15785 309 aaPredicted RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 ATP6AP1Q15904 470 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 SNCBQ16143 134 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 PRR4Q16378 134 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CYP51A1Q16850 503 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 SLC5A12Q1EHB4 618 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 EXOC3L2Q2M3D2 409 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CYBRD1Q53TN4 286 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 OR5M10Q6IEU7 315 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 UGT2A3Q6UWM9 527 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 FAM159AQ6UWV7 190 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 IZUMO2Q6UXV1 221 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TMIGD1Q6UXZ0 262 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TFAP2EQ6VUC0 442 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 HACD2Q6Y1H2 254 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TMEM26Q6ZUK4 368 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 Q6ZVH6 145 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 COX15Q7KZN9 410 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 LRRC70Q7Z2Q7 622 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 EFL1Q7Z2Z2 1120 aaKnown RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 P4HA3Q7Z4N8 544 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 NET1Q7Z628 596 aaPredicted RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 CROCCP2Q86T23 111 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TRIM69Q86WT6 500 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 C17orf82Q86X59 251 aaPredicted RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 NKAIN4Q8IVV8 208 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CCDC36Q8IYA8 594 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TBC1D21Q8IYX1 336 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 PGAM4Q8N0Y7 254 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 BATF2Q8N1L9 274 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CBR4Q8N4T8 237 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CLDN22Q8N7P3 220 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 ACBD4Q8NC06 268 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CNIH3Q8TBE1 160 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 SETD7Q8WTS6 366 aaKnown RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 ASZ1Q8WWH4 475 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 PEX13Q92968 403 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TMBIM1Q969X1 311 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CXorf40BQ96DE9 158 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 SLC25A38Q96DW6 304 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 WDR34Q96EX3 536 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 C16orf74Q96GX8 76 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TPD52L3Q96J77 140 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CNBD2Q96M20 576 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 RNF145Q96MT1 663 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 OR7D2Q96RA2 312 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 ATP6V0BQ99437 205 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CIB1Q99828 191 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 NIPSNAP1Q9BPW8 284 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 ECSITQ9BQ95 431 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 SLC35A5Q9BS91 424 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 CHID1Q9BWS9 393 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 HES7Q9BYE0 225 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TTTY10Q9BZA0 68 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 NSRP1Q9H0G5 558 aaKnown RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 SRMSQ9H3Y6 488 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 ELOVL6Q9H5J4 265 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 REEP4Q9H6H4 257 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 C8orf33Q9H7E9 229 aaPredicted RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 EFCAB1Q9HAE3 211 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TPT1P8Q9HAU6 139 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 PNO1Q9NRX1 252 aaKnown RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 PAK1IP1Q9NWT1 392 aaPredicted RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 EHFQ9NZC4 300 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 VPS29Q9UBQ0 182 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms