RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ZNF645Q8N7E2 425 aa1.28□□□□□ -2.2
SMC4-227ENST00000497984 OR51E1Q8TCB6 317 aa1.28□□□□□ -2.2
SMC4-227ENST00000497984 N4BP2L2Q92802 583 aaPredicted RBP1.28□□□□□ -2.2
SMC4-227ENST00000497984 KCNS1Q96KK3 526 aa1.28□□□□□ -2.2
SMC4-227ENST00000497984 STACQ99469 402 aa1.28□□□□□ -2.2
SMC4-227ENST00000497984 NUDT9Q9BW91 350 aa1.28□□□□□ -2.2
SMC4-227ENST00000497984 TRIM45Q9H8W5 580 aaPredicted RBP1.28□□□□□ -2.2
SMC4-227ENST00000497984 R4GN34 69 aa1.28□□□□□ -2.2
SMC4-227ENST00000497984 SORL1Q92673 2214 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 HEATR9A2RTY3 570 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 XKRY2A2RUG3 117 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 H7C1H1 209 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 SERPINB7O75635 380 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 SCO1O75880 301 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 OR2J3O76001 311 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 FSTL3O95633 263 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 PFN2P35080 140 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 FUSP35637 526 aaKnown RBP eCLIP1.27□□□□□ -2.21
SMC4-227ENST00000497984 CMC4P56277 68 aaPredicted RBP1.27□□□□□ -2.21
SMC4-227ENST00000497984 TAS2R43P59537 309 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 TAS2R46P59540 309 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 IFITM3Q01628 133 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 LIPEQ05469 1076 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 KDSRQ06136 332 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 TTC23LQ6PF05 361 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 SPNS3Q6ZMD2 512 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 TMPRSS11AQ6ZMR5 421 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 UBAC2Q8NBM4 344 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 OR4A4PQ8NGN8 299 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 OR5K2Q8NHB8 316 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 AKR7LQ8NHP1 331 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 CMTM2Q8TAZ6 248 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 ELMO1Q92556 727 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 CENPKQ9BS16 269 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 MARVELD1Q9BSK0 173 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 SLIRPQ9GZT3 109 aaKnown RBP1.27□□□□□ -2.21
SMC4-227ENST00000497984 ANKRA2Q9H9E1 313 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 HES2Q9Y543 173 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 LRRC42Q9Y546 428 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 TRIP11Q15643 1979 aa1.27□□□□□ -2.21
SMC4-227ENST00000497984 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.26□□□□□ -2.213e-9■■■■■ 74.3
SMC4-227ENST00000497984 PCDH11XQ9BZA7 1347 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 IGKV1-27A0A075B6S5 117 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 TRBV11-1A0A0K0K1C0 115 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 CENPBD1B2RD01 187 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 EIF3HO15372 352 aaKnown RBP eCLIP1.26□□□□□ -2.21
SMC4-227ENST00000497984 MMP7P09237 267 aaPredicted RBP1.26□□□□□ -2.21
SMC4-227ENST00000497984 CD99P14209 185 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 OTX1P32242 354 aaPredicted RBP1.26□□□□□ -2.21
SMC4-227ENST00000497984 CRISP1P54107 249 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 ELF3P78545 371 aaPredicted RBP1.26□□□□□ -2.21
SMC4-227ENST00000497984 SELENBP1Q13228 472 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 LUZP6Q538Z0 58 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 PRAMEF20Q5VT98 475 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 TCF24Q7RTU0 167 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 GPR26Q8NDV2 337 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 Q8NDZ9 215 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 CAPSLQ8WWF8 208 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 GHSRQ92847 366 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 SLC38A4Q969I6 547 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 C18orf15Q96N68 181 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 KCNS3Q9BQ31 491 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 PLEKHF2Q9H8W4 249 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 RRAGDQ9NQL2 400 aaPredicted RBP1.26□□□□□ -2.21
SMC4-227ENST00000497984 ZNF492Q9P255 531 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 CLN8Q9UBY8 286 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 SLC17A4Q9Y2C5 497 aa1.26□□□□□ -2.21
SMC4-227ENST00000497984 NACADO15069 1562 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 TICRRQ7Z2Z1 1910 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 SMCO3A2RU48 225 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 OR2AG2A6NM03 316 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 A8MWL6 223 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 D6RAR5 112 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 RAB4AP20338 218 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 MYL9P24844 172 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 HLA-DMAP28067 261 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 PBLDP30039 288 aaPredicted RBP1.25□□□□□ -2.21
SMC4-227ENST00000497984 CD70P32970 193 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 MPIP34949 423 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 ZNF266Q14584 549 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 FAM104BQ5XKR9 115 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 SNX31Q8N9S9 440 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 BPIFCQ8NFQ6 507 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 LYPD6BQ8NI32 183 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 RXFP4Q8TDU9 374 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 ECHDC3Q96DC8 303 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 TPD52L3Q96J77 140 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 OR4K3Q96R72 315 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 TEAD3Q99594 435 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 PDCD1LG2Q9BQ51 273 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 NUP58Q9BVL2 599 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 ZNF442Q9H7R0 627 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 RETNQ9HD89 108 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 RGS18Q9NS28 235 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 SLC39A1Q9NY26 324 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 PITPNC1Q9UKF7 332 aa1.25□□□□□ -2.21
SMC4-227ENST00000497984 C9JVG2 144 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 AP3B1O00203 1094 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 RNF13O43567 381 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 NMT2O60551 498 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms