RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 LAMP3Q9UQV4 416 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 RAI1Q7Z5J4 1906 aaPredicted RBP17.17■□□□□ 0.34
CTSD-206ENST00000497544 C5orf63A6NC05 138 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 MYL12BO14950 172 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 SRSF10O75494 262 aaKnown RBP17.17■□□□□ 0.34
CTSD-206ENST00000497544 CLPTM1O96005 669 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 DANCRP0C864 163 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 RAC2P15153 192 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 CFL1P23528 166 aaKnown RBP17.17■□□□□ 0.34
CTSD-206ENST00000497544 MPV17P39210 176 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 EVX1P49640 407 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 ZNF92Q03936 586 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 MFGE8Q08431 387 aaPredicted RBP17.17■□□□□ 0.34
CTSD-206ENST00000497544 MRPL28Q13084 256 aaKnown RBP17.17■□□□□ 0.34
CTSD-206ENST00000497544 HLXQ14774 488 aaPredicted RBP17.17■□□□□ 0.34
CTSD-206ENST00000497544 GFOD2Q3B7J2 385 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 BCL2L15Q5TBC7 163 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 RNLSQ5VYX0 342 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 FBXW12Q6X9E4 464 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 PGAP1Q75T13 922 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 LRP11Q86VZ4 500 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 OR52N1Q8NH53 320 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 OR2AE1Q8NHA4 323 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 HAVCR2Q8TDQ0 301 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 GATAD2BQ8WXI9 593 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 PPP1R14AQ96A00 147 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 SMR3AQ99954 134 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 CDCA4Q9BXL8 241 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 RGCCQ9H4X1 137 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 G6PC2Q9NQR9 355 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 CBLN4Q9NTU7 201 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 ZNF319Q9P2F9 582 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 NUFIP1Q9UHK0 495 aaKnown RBP17.17■□□□□ 0.34
CTSD-206ENST00000497544 GPR160Q9UJ42 338 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 LRCH1Q9Y2L9 728 aa17.17■□□□□ 0.34
CTSD-206ENST00000497544 A0A1W2PPW3 197 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 TMEM129A0AVI4 362 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 BMP4P12644 408 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 GABARAPL2P60520 117 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 PSG7Q13046 419 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 GK2Q14410 553 aaPredicted RBP17.16■□□□□ 0.34
CTSD-206ENST00000497544 EFNB3Q15768 340 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 PRSS48Q7RTY5 328 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 CATSPERDQ86XM0 798 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 ELMOD2Q8IZ81 293 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 NANOGP1Q8N7R0 232 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 REEP6Q96HR9 211 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 OPA3Q9H6K4 179 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 BABAM2Q9NXR7 383 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 TAAR3PQ9P1P4 343 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 SLC22A13Q9Y226 551 aa17.16■□□□□ 0.34
CTSD-206ENST00000497544 IGLV3-9A0A075B6K5 115 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 GGT3PA6NGU5 568 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 TIMM8AO60220 97 aaPredicted RBP17.15■□□□□ 0.34
CTSD-206ENST00000497544 IGHV3-13P01766 116 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 SOD3P08294 240 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 SELEP16581 610 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 ANOS1P23352 680 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 WNT4P56705 351 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 MST1LQ2TV78 715 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 FDX2Q6P4F2 183 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 DTX2Q86UW9 622 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 COMMD2Q86X83 199 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 KLBQ86Z14 1044 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 OR2G2Q8NGZ5 317 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 SPSB4Q96A44 273 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 MND1Q9BWT6 205 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 LIME1Q9H400 295 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 ZNF391Q9UJN7 358 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 PURGQ9UJV8 347 aaKnown RBP17.15■□□□□ 0.34
CTSD-206ENST00000497544 PMF1-BGLAPU3KQ54 211 aa17.15■□□□□ 0.34
CTSD-206ENST00000497544 ATRQ13535 2644 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 ARFGEF3Q5TH69 2177 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 A0A0U1RQV5 110 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 MRPS14O60783 128 aaKnown RBP17.14■□□□□ 0.33
CTSD-206ENST00000497544 CD8AP01732 235 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 TTRP02766 147 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 MT-ND2P03891 347 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 KITLGP21583 273 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 SNRPD2P62316 118 aaKnown RBP17.14■□□□□ 0.33
CTSD-206ENST00000497544 ALKBH1Q13686 389 aaKnown RBP17.14■□□□□ 0.33
CTSD-206ENST00000497544 NKPD1Q17RQ9 610 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 SWI5Q1ZZU3 235 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 WDR38Q5JTN6 314 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 OR2T2Q6IF00 324 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 BIVMQ86UB2 503 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 CCL19Q99731 98 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 TRAF4Q9BUZ4 470 aaPredicted RBP17.14■□□□□ 0.33
CTSD-206ENST00000497544 DYNLRB1Q9NP97 96 aa17.14■□□□□ 0.33
CTSD-206ENST00000497544 FBXO9Q9UK97 447 aaPredicted RBP17.14■□□□□ 0.33
CTSD-206ENST00000497544 E9PI62 339 aa17.13■□□□□ 0.33
CTSD-206ENST00000497544 LIPAP38571 399 aa17.13■□□□□ 0.33
CTSD-206ENST00000497544 TGM4P49221 684 aa17.13■□□□□ 0.33
CTSD-206ENST00000497544 CHN2P52757 468 aa17.13■□□□□ 0.33
CTSD-206ENST00000497544 PRSS12P56730 875 aa17.13■□□□□ 0.33
CTSD-206ENST00000497544 IRF3Q14653 427 aa17.13■□□□□ 0.33
CTSD-206ENST00000497544 ODF4Q2M2E3 257 aa17.13■□□□□ 0.33
CTSD-206ENST00000497544 PRSS35Q8N3Z0 413 aa17.13■□□□□ 0.33
CTSD-206ENST00000497544 OR51E1Q8TCB6 317 aa17.13■□□□□ 0.33
CTSD-206ENST00000497544 PIGTQ969N2 578 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms