RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 TRMT5Q32P41 509 aaKnown RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 HNRNPA1L2Q32P51 320 aaKnown RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 HSP90AA4PQ58FG1 418 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 CCNJQ5T5M9 372 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 TPTE2P1Q5T6R2 138 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 AADACL4Q5VUY2 407 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 UBE2UQ5VVX9 321 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 GPR107Q5VW38 600 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 ANKRD22Q5VYY1 191 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 TEX43Q6ZNM6 134 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 MRPL21Q7Z2W9 205 aaKnown RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 OAFQ86UD1 273 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 CBLN2Q8IUK8 224 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 TRAM1L1Q8N609 369 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 OR5T3Q8NGG3 340 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 OR1P1Q8NH06 330 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 CA5BP1Q8WTZ4 195 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 MITD1Q8WV92 249 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 PIH1D2Q8WWB5 315 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 RAB1CQ92928 201 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 NAT6Q93015 286 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 TOP1MTQ969P6 601 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 EEF1AKMT3Q96AZ1 226 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 FAM3DQ96BQ1 224 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 DNAJC1Q96KC8 554 aaKnown RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 C9orf72Q96LT7 481 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 COL21A1Q96P44 957 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 CSPG4P5Q96PW8 444 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 MICU1Q9BPX6 476 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 SAV1Q9H4B6 383 aaPredicted RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 XKR8Q9H6D3 395 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 ACP6Q9NPH0 428 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 ZC4H2Q9NQZ6 224 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 DYRK4Q9NR20 520 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 CLN6Q9NWW5 311 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 CTSFQ9UBX1 484 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 ST3GAL6Q9Y274 331 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 YARS2Q9Y2Z4 477 aaKnown RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 UBN2Q6ZU65 1347 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 MAPK8IP3Q9UPT6 1336 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 KIF27Q86VH2 1401 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 CAMTA1Q9Y6Y1 1673 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 PRRC2BQ5JSZ5 2229 aaKnown RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 BAZ2AQ9UIF9 1905 aaKnown RBP1.27□□□□□ -2.21
VPS26A-208ENST00000497022 COL22A1Q8NFW1 1626 aaPredicted RBP1.27□□□□□ -2.21
VPS26A-208ENST00000497022 TRAV6A0A075B6T7 132 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 TSPAN11A1L157 253 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 NCBP2LA6PVI3 153 aaKnown RBP1.27□□□□□ -2.21
VPS26A-208ENST00000497022 NDUFS8O00217 210 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 PLPP1O14494 284 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 KDELR3O43731 214 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 HSBP1O75506 76 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 FLOT1O75955 427 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 FARS2O95363 451 aaKnown RBP1.27□□□□□ -2.21
VPS26A-208ENST00000497022 RAB3DO95716 219 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 UBTFL6P0CB48 400 aaPredicted RBP1.27□□□□□ -2.21
VPS26A-208ENST00000497022 OR5H8P0DN80 308 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 LGALS3P17931 250 aaKnown RBP1.27□□□□□ -2.21
VPS26A-208ENST00000497022 GGT1P19440 569 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 RAB4AP20338 218 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 PMCHP20382 165 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 F2RP25116 425 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 GABRR2P28476 465 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 BMI1P35226 326 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 CFHR2P36980 270 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 CEACAM6P40199 344 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 RFC3P40938 356 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 GPR1P46091 355 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 CCNG1P51959 295 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 RND2P52198 227 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 ZNF138P52744 262 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 PSMD4P55036 377 aaKnown RBP1.27□□□□□ -2.21
VPS26A-208ENST00000497022 FLI1Q01543 452 aaPredicted RBP1.27□□□□□ -2.21
VPS26A-208ENST00000497022 PON2Q15165 354 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 STK38Q15208 465 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 RGNQ15493 299 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 ZSCAN26Q16670 478 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 PTPN20Q4JDL3 420 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 MLIPQ5VWP3 458 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 ARL9Q6T311 187 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 TMEM205Q6UW68 189 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 MBOAT2Q6ZWT7 520 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 ZFP41Q8N8Y5 198 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 TMEM104Q8NE00 496 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 OR4K5Q8NGD3 323 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 OR4A15Q8NGL6 344 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 OR10J6PQ8NGY7 276 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 CIRBP-AS1Q8TBR5 109 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 OR51E1Q8TCB6 317 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 C17orf50Q8WW18 174 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 APH1BQ8WW43 257 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 TMEM230Q96A57 120 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 RPEQ96AT9 228 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 APH1AQ96BI3 265 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 DEFB129Q9H1M3 183 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 HAUS4Q9H6D7 363 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 TMEM9BQ9NQ34 198 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 PRSS16Q9NQE7 514 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 COMMD3-BMI1R4GMX3 469 aa1.27□□□□□ -2.21
VPS26A-208ENST00000497022 DYSFO75923 2080 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms