RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 R4GMQ9 66 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 RRP9O43818 475 aaKnown RBP16.51■□□□□ 0.23
HDAC4-212ENST00000495497 CDC14BO60729 498 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 HLA-DPB1P04440 258 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 PSMB10P40306 273 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 PDLIM4P50479 330 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 ACTC1P68032 377 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 ACTA1P68133 377 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 RAB40BQ12829 278 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 PCGF3Q3KNV8 242 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 ACBD7Q8N6N7 88 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 OR10AD1Q8NGE0 317 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 OR56B2PQ8NGI1 322 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 C10orf105Q8TEF2 133 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 ELMOD3Q96FG2 381 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 SIGLEC11Q96RL6 698 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 SLC30A2Q9BRI3 323 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 G6PC2Q9NQR9 355 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 MRPS18AQ9NVS2 196 aaKnown RBP16.51■□□□□ 0.23
HDAC4-212ENST00000495497 NKIRAS2Q9NYR9 191 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 TREM2Q9NZC2 230 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 ZDHHC8Q9ULC8 765 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 PCDHGB1Q9Y5G3 927 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 HSPE1-MOB4S4R3N1 261 aa16.51■□□□□ 0.23
HDAC4-212ENST00000495497 MAP1AP78559 2803 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-212ENST00000495497 hCG_38984A0A1B0GV85 526 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 RNF223E7ERA6 249 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 H7C1Q1 480 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 MLNRO43193 412 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 ADH4P08319 380 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 GSK3AP49840 483 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 MMP16P51512 607 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 OR12D2P58182 307 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 TNFAIP6P98066 277 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-212ENST00000495497 CDONQ4KMG0 1287 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 KLHL22Q53GT1 634 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 ZMAT1Q5H9K5 638 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 LIPNQ5VXI9 398 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 THAP5Q7Z6K1 395 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 MAPK1IP1LQ8NDC0 245 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 FBLIM1Q8WUP2 373 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 DVL3Q92997 716 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-212ENST00000495497 TMUB1Q9BVT8 246 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 SAP30LQ9HAJ7 183 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 ACOXLQ9NUZ1 547 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 TMEM100Q9NV29 134 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 SLC22A13Q9Y226 551 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 CACNG2Q9Y698 323 aa16.5■□□□□ 0.23
HDAC4-212ENST00000495497 IGHV3-64DA0A0J9YX35 117 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 ACOD1A6NK06 481 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 LOC110117498-PIK3R3F6TDL0 507 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 J3QLW9 94 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 SMAD7O15105 426 aaKnown RBP16.49■□□□□ 0.23
HDAC4-212ENST00000495497 FAM20BO75063 409 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 SULT1C4O75897 302 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 FADS2O95864 444 aaKnown RBP16.49■□□□□ 0.23
HDAC4-212ENST00000495497 IGHA1P01876 353 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 ZNF19P17023 458 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 CA6P23280 308 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 DSCR9P59020 149 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 FAM209AQ5JX71 171 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 ZNF786Q8N393 782 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 OR13G1Q8NGZ3 307 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 OR51E1Q8TCB6 317 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 ITLN1Q8WWA0 313 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 RORBQ92753 470 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 RDH5Q92781 318 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 DIRC2Q96SL1 478 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 ZNF649Q9BS31 505 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 ALG8Q9BVK2 526 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 OPA3Q9H6K4 179 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 PPP1R3EQ9H7J1 279 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 NUFIP1Q9UHK0 495 aaKnown RBP16.49■□□□□ 0.23
HDAC4-212ENST00000495497 OR52A1Q9UKL2 312 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 SNX5Q9Y5X3 404 aa16.49■□□□□ 0.23
HDAC4-212ENST00000495497 F5H5P2 479 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 XPNPEP2O43895 674 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 TTRP02766 147 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 CD55P08174 381 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 CD99P14209 185 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 VHLP40337 213 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 GALEQ14376 348 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 ODF4Q2M2E3 257 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 BCL2L15Q5TBC7 163 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 FAM220AQ7Z4H9 259 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 CATSPERDQ86XM0 798 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 BPIFB6Q8NFQ5 453 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 GGHQ92820 318 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 RNF166Q96A37 237 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-212ENST00000495497 OR2V2Q96R30 315 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 RGCCQ9H4X1 137 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 ISG20L2Q9H9L3 353 aaKnown RBP16.48■□□□□ 0.23
HDAC4-212ENST00000495497 FGF20Q9NP95 211 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-212ENST00000495497 MYOZ1Q9NP98 299 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-212ENST00000495497 GPR84Q9NQS5 396 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 ERVK13-1Q9NX77 482 aa16.48■□□□□ 0.23
HDAC4-212ENST00000495497 ITPR3Q14573 2671 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 CELSR1Q9NYQ6 3014 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 A0A0U1RQV5 110 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 LOC390937A0A1W2PQ73 354 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms