RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 GSTA4O15217 222 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 ADAM20O43506 726 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 CA6P23280 308 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 SLC6A6P31641 620 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 TGFBR2P37173 567 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 KRTAP10-3P60369 221 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 MEP1BQ16820 701 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 ATPAF1Q5TC12 328 aaPredicted RBP12.39□□□□□ -0.43
NUP58-214ENST00000495460 C11orf88Q6PI97 169 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 CORO6Q6QEF8 472 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 MRPL21Q7Z2W9 205 aaKnown RBP12.39□□□□□ -0.43
NUP58-214ENST00000495460 GALNT4Q8N4A0 578 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 UBE2FQ969M7 185 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 SPSB4Q96A44 273 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 ERMAPQ96PL5 475 aaPredicted RBP12.39□□□□□ -0.43
NUP58-214ENST00000495460 WDR76Q9H967 626 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 TCF7L1Q9HCS4 588 aa12.39□□□□□ -0.43
NUP58-214ENST00000495460 DCAF13Q9NV06 445 aaKnown RBP12.39□□□□□ -0.43
NUP58-214ENST00000495460 RPUSD1Q9UJJ7 312 aaKnown RBP12.39□□□□□ -0.43
NUP58-214ENST00000495460 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.38□□□□□ -0.43
NUP58-214ENST00000495460 M0R135 149 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 NME4O00746 187 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 TIPRLO75663 272 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 NOS3P29474 1203 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 GRK5P34947 590 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 GSK3BP49841 420 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 SEC23BQ15437 767 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 PCK2Q16822 640 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 RUSC1-AS1Q66K80 236 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 BTN2A1Q7KYR7 527 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 NAA40Q86UY6 237 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 GCSAMQ8N6F7 178 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 DTX3Q8N9I9 347 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 OR4C15Q8NGM1 316 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 RCN3Q96D15 328 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 ZNF799Q96GE5 643 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 NMNAT3Q96T66 252 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 DNTTIP1Q9H147 329 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 MMADHCQ9H3L0 296 aaPredicted RBP12.38□□□□□ -0.43
NUP58-214ENST00000495460 GORASP2Q9H8Y8 452 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 SMURF1Q9HCE7 757 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 UFSP2Q9NUQ7 469 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 ABCD2Q9UBJ2 740 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 FBLN5Q9UBX5 448 aa12.38□□□□□ -0.43
NUP58-214ENST00000495460 SAMD4AQ9UPU9 718 aaKnown RBP12.38□□□□□ -0.43
NUP58-214ENST00000495460 TRBV4-1A0A0J9YWV2 114 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 OR6C68A6NDL8 312 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 DVL1O14640 695 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 IGHV4-59P01825 116 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 FBP1P09467 338 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 HIST1H1CP16403 213 aaKnown RBP12.37□□□□□ -0.43
NUP58-214ENST00000495460 IFNGR2P38484 337 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 ZNF92Q03936 586 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 KRT72Q14CN4 511 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 OR8B8Q15620 311 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 MICBQ29980 383 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 C2orf68Q2NKX9 166 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 TEX30Q5JUR7 227 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 PRAMEF6Q5VXH4 476 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 SFRP4Q6FHJ7 346 aaPredicted RBP12.37□□□□□ -0.43
NUP58-214ENST00000495460 FAM90A1Q86YD7 464 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 OR5R1Q8NH85 324 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 C8orf46Q8TAG6 207 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 LHX4Q969G2 390 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 MAP6Q96JE9 813 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 DDOQ99489 341 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 ADAT1Q9BUB4 502 aaKnown RBP12.37□□□□□ -0.43
NUP58-214ENST00000495460 OR52D1Q9H346 318 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 VPREB3Q9UKI3 123 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 PRPF19Q9UMS4 504 aaKnown RBP12.37□□□□□ -0.43
NUP58-214ENST00000495460 FAM96BQ9Y3D0 163 aa12.37□□□□□ -0.43
NUP58-214ENST00000495460 IGHV3-64DA0A0J9YX35 117 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 A0A0U1RQK1 487 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 BHLHE40O14503 412 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 XRCC2O43543 280 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 COX4I1P13073 169 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 ZNF823P16415 610 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 CENPAP49450 140 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 ARF6P62330 175 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 SNCBQ16143 134 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 FGD3Q5JSP0 725 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 KPRPQ5T749 579 aaPredicted RBP12.36□□□□□ -0.43
NUP58-214ENST00000495460 OTPQ5XKR4 325 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 RPL13AP3Q6NVV1 102 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 Q6ZSV7 163 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 SLC36A1Q7Z2H8 476 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 CMTM4Q8IZR5 234 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 CYB561A3Q8NBI2 242 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 ITFG2Q969R8 447 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 FAM162AQ96A26 154 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 PKP2Q99959 881 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 CCDC134Q9H6E4 229 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 SP140LQ9H930 580 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 RPRD1BQ9NQG5 326 aaKnown RBP12.36□□□□□ -0.43
NUP58-214ENST00000495460 MRPL22Q9NWU5 206 aaKnown RBP12.36□□□□□ -0.43
NUP58-214ENST00000495460 C1orf123Q9NWV4 160 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 ZNRD1Q9P1U0 126 aa12.36□□□□□ -0.43
NUP58-214ENST00000495460 BTBD17A6NE02 478 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 GGT3PA6NGU5 568 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 RNASEK-C17orf49H0YIS7 233 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms