RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	PLXDC1	Q8IUK5	500 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	MISP	Q8IVT2	679 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF283	Q8N7M2	679 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ST8SIA1	Q92185	356 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CNTNAP3B	Q96NU0	1288 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PURG	Q9UJV8	347 aa	Known RBP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	RAB19	A4D1S5	217 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	MPTX1	A8MV57	137 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ABCD4	O14678	606 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CHRM2	P08172	466 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	BCKDHB	P21953	392 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	APOBEC1	P41238	236 aa	Known RBP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SCRN3	Q0VDG4	424 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	AKIRIN2	Q53H80	203 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	H3F3C	Q6NXT2	135 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	UEVLD	Q8IX04	471 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	HRH4	Q9H3N8	390 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	UCK1	Q9HA47	277 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SDHAF3	Q9NRP4	125 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SERINC1	Q9NRX5	453 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	GPR27	Q9NS67	375 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FGF21	Q9NSA1	209 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PPP4R1L	Q9P1A2	415 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ASH2L	Q9UBL3	628 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	LRP4	O75096	1905 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR6C76	A6NM76	312 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FARS2	O95363	451 aa	Known RBP	11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SFTPB	P07988	381 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	HLA-G	P17693	338 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	LAP3	P28838	519 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR3A4P	P47883	348 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CX3CR1	P49238	355 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	RNF144B	Q7Z419	303 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CBLN2	Q8IUK8	224 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	KCNG3	Q8TAE7	436 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FAM117A	Q9C073	453 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	GPR84	Q9NQS5	396 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PRELID3B	Q9Y3B1	194 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	THADA	Q6YHU6	1953 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071		A0A1W2PP11	408 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ANKUB1	A6NFN9	424 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SDCBP	O00560	298 aa	Predicted RBP	11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SIGLEC6	O43699	453 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	DUX1	O43812	170 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SSX5	O60225	188 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	URM1	Q9BTM9	101 aa	Known RBP	11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SPAG17	Q6Q759	2223 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	RTTN	Q86VV8	2226 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PCDH15	Q96QU1	1955 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF354A	O60765	605 aa	Predicted RBP	11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF217	O75362	1048 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	F12	P00748	615 aa	Predicted RBP	11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	HOXB5	P09067	269 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CSNK2A1	P68400	391 aa	Predicted RBP	11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CSNK2A3	Q8NEV1	391 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	MAFIP	Q8WZ33	124 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SCGB3A2	Q96PL1	93 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CDC6	Q99741	560 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	MESP1	Q9BRJ9	268 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SOX7	Q9BT81	388 aa		11.92	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF878	C9JN71	531 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	KNG1	P01042	644 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CD27	P26842	260 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PABPC1L2A	Q5JQF8	200 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FAM57B	Q71RH2	274 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	HOGA1	Q86XE5	327 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	S100A13	Q99584	98 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	LPAR5	Q9H1C0	372 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	METTL7A	Q9H8H3	244 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	LMO7DN	F2Z398	122 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	HEXB	P07686	556 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	HIST1H1D	P16402	221 aa	Known RBP	11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF121	P58317	390 aa	Predicted RBP	11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	GPR85	P60893	370 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZP4	Q12836	540 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR51T1	Q8NGJ9	327 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	STT3B	Q8TCJ2	826 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ARHGAP5-AS1	Q96IT6	56 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR5B2	Q96R09	309 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FN3KRP	Q9HA64	309 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	B3GALT5	Q9Y2C3	310 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	MED12	Q93074	2177 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ACTL6A	O96019	429 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	IGHG1	P01857	330 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CD37	P11049	281 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SFTPD	P35247	375 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	GUCA1A	P43080	201 aa	Predicted RBP	11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	DHPS	P49366	369 aa	Predicted RBP	11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FAM69B	Q5VUD6	431 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CLEC18B	Q6UXF7	455 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TMPRSS9	Q7Z410	1059 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TMEM200A	Q86VY9	491 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PNLDC1	Q8NA58	520 aa	Known RBP	11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	STOML3	Q8TAV4	291 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms