RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 PCK2Q16822 640 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 EMC4Q5J8M3 183 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 YOD1Q5VVQ6 348 aaPredicted RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 LEMD1Q68G75 181 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 OR4C11Q6IEV9 310 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 OR8G2PQ6IF36 304 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 CLEC18BQ6UXF7 455 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 TCF24Q7RTU0 167 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 FAM220AQ7Z4H9 259 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 AMER3Q8N944 861 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 LRTM2Q8N967 370 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 OR4X1Q8NH49 305 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 OR5K2Q8NHB8 316 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 OR14L1PQ8NHC6 308 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 KLK6Q92876 244 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM18Q96B42 140 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 LMLNQ96KR4 655 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 MENTQ9BUN1 341 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 MAGT1Q9H0U3 335 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 C5orf66Q9H5L9 145 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 RBPJLQ9UBG7 517 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 RAB22AQ9UL26 194 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 KCNE3Q9Y6H6 103 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 C5orf51A6NDU8 294 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 CA11O75493 328 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 TBX18O95935 607 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 CST2P09228 141 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 UCP1P25874 307 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ARR3P36575 388 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 TAF10Q12962 218 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 RAB32Q13637 225 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ICAM4Q14773 271 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 COL5A1-AS1Q5SY13 56 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 CNKSR3Q6P9H4 555 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 SMIM15Q7Z3B0 74 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 LINC01551Q86U37 167 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 JAGN1Q8N5M9 183 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ADAMTS15Q8TE58 950 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 OIT3Q8WWZ8 545 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 TMEM159Q96B96 161 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 Q96M85 177 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 PRRX2Q99811 253 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 MRPL42Q9Y6G3 142 aaKnown RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 B4E171 279 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 E5RGE8 158 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 CYB5BO43169 146 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 STC2O76061 302 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ISG15P05161 165 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 HIST1H1CP16403 213 aaKnown RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 PBX2P40425 430 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 PTTG1IPP53801 180 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 SLC37A1P57057 533 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ADAM8P78325 824 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ROM1Q03395 351 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 LMAN2Q12907 356 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ACTL10Q5JWF8 245 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 PRAMEF14Q5SWL7 426 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 SLC48A1Q6P1K1 146 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 FAM219AQ8IW50 185 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 C20orf196Q8IYI0 205 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 H1FOOQ8IZA3 346 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF619Q8N2I2 560 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 GBGT1Q8N5D6 347 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 LRRC75AQ8NAA5 344 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 APCDD1LQ8NCL9 501 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ZMYND19Q96E35 227 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ABHD14BQ96IU4 210 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 OR10C1Q96KK4 312 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 P2RX4Q99571 388 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 RTBDNQ9BSG5 229 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 KLF16Q9BXK1 252 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ELL3Q9HB65 397 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 SEMA5BQ9P283 1151 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 NSG2Q9Y328 171 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 MEIS3P2A8K0S8 358 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 CXCL11O14625 94 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 SRSF10O75494 262 aaKnown RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 SCAF4O95104 1147 aaKnown RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 SNAI1O95863 264 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 MBPP02686 304 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 KLKB1P03952 638 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 PFN1P07737 140 aaKnown RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 IRF2P14316 349 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 FCGR2CP31995 323 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 GALNSP34059 522 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 PSMB10P40306 273 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 OR3A2P47893 321 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 NCBP2P52298 156 aaKnown RBP eCLIP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 TMEM33P57088 247 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 FAM3BP58499 235 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 UBE2KP61086 200 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ARF6P62330 175 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 HLA-DRB3P79483 266 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ACOT6Q3I5F7 207 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ANKRD55Q3KP44 614 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 IER5LQ5T953 404 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 FCRL6Q6DN72 434 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 MFSD12Q6NUT3 480 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF429Q86V71 674 aa4.27□□□□□ -1.73
PRKD3-210ENST00000494667 NRSN1Q8IZ57 195 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms